IDEAS home Printed from https://ideas.repec.org/a/gam/jdataj/v5y2020i3p58-d378486.html
   My bibliography  Save this article

An Update to the TraVA Database: Time Series of Capsella bursa-pastoris Shoot Apical Meristems during Transition to Flowering

Author

Listed:
  • Anna V. Klepikova

    (Institute for Information Transmission Problems of the Russian Academy of Sciences, 127051 Moscow, Russia)

  • Artem S. Kasianov

    (Institute for Information Transmission Problems of the Russian Academy of Sciences, 127051 Moscow, Russia
    N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia)

Abstract

Transition to flowering is a crucial part of plant life directly affecting the fitness of a plant. Time series of transcriptomes is a useful tool for the investigation of process dynamics and can be used for the identification of novel genes and gene networks involved in the process. We present a detailed time series of polyploid Capsella bursa-pastoris shoot apical meristems created with RNA-seq. The time series covers transition to flowering and can be used for thorough analysis of the process. To make the data easy to access, we uploaded them in our database Transcriptome Variation Analysis (TraVA), which provides a convenient depiction of the gene expression profiles, the differential expression analysis between the homeologs and quick data extraction.

Suggested Citation

  • Anna V. Klepikova & Artem S. Kasianov, 2020. "An Update to the TraVA Database: Time Series of Capsella bursa-pastoris Shoot Apical Meristems during Transition to Flowering," Data, MDPI, vol. 5(3), pages 1-6, June.
    • Handle: RePEc:gam:jdataj:v:5:y:2020:i:3:p:58-:d:378486
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2306-5729/5/3/58/pdf
    Download Restriction: no
    File URL: https://www.mdpi.com/2306-5729/5/3/58/
    Download Restriction: no
    ---><---

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jdataj:v:5:y:2020:i:3:p:58-:d:378486. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.