IDEAS home Printed from https://ideas.repec.org/a/eee/chsofr/v199y2025ip1s0960077925006125.html

Scalar embedding of temporal network trajectories

Author

Listed:
  • Lacasa, Lucas
  • Marín-Rodríguez, F. Javier
  • Masuda, Naoki
  • Arola-Fernández, Lluís

Abstract

A temporal network – a collection of snapshots recording the evolution of a network whose links appear and disappear dynamically – can be interpreted as a trajectory in graph space. In order to characterize the complex dynamics of such trajectory via the tools of time series analysis and signal processing, it is sensible to preprocess the trajectory by embedding it in a low-dimensional Euclidean space. Here we argue that, rather than the topological structure of each network snapshot, the main property of the trajectory that needs to be preserved in the embedding is the relative graph distance between snapshots. This idea naturally leads to dimensionality reduction approaches that explicitly consider relative distances, such as Multidimensional Scaling (MDS) or identifying the distance matrix as a feature matrix in which to perform Principal Component Analysis (PCA). This paper provides a comprehensible methodology that illustrates this approach. Its application to a suite of generative network trajectory models and empirical data certify that nontrivial dynamical properties of the network trajectories are preserved already in their scalar embeddings, what enables the possibility of performing time series analysis in temporal networks.

Suggested Citation

  • Lacasa, Lucas & Marín-Rodríguez, F. Javier & Masuda, Naoki & Arola-Fernández, Lluís, 2025. "Scalar embedding of temporal network trajectories," Chaos, Solitons & Fractals, Elsevier, vol. 199(P1).
  • Handle: RePEc:eee:chsofr:v:199:y:2025:i:p1:s0960077925006125
    DOI: 10.1016/j.chaos.2025.116599
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0960077925006125
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.chaos.2025.116599?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to

    for a different version of it.

    References listed on IDEAS

    as
    1. Jean-Charles Delvenne & Renaud Lambiotte & Luis E. C. Rocha, 2015. "Diffusion on networked systems is a question of time or structure," Nature Communications, Nature, vol. 6(1), pages 1-10, November.
    2. Oliver E. Williams & Lucas Lacasa & Ana P. Millán & Vito Latora, 2022. "The shape of memory in temporal networks," Nature Communications, Nature, vol. 13(1), pages 1-8, December.
    3. Lorenzo Dall’Amico & Alain Barrat & Ciro Cattuto, 2024. "An embedding-based distance for temporal graphs," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    4. Petter Holme, 2015. "Modern temporal network theory: a colloquium," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 88(9), pages 1-30, September.
    5. Enrico Ser-Giacomi & Alberto Baudena & Vincent Rossi & Mick Follows & Sophie Clayton & Ruggero Vasile & Cristóbal López & Emilio Hernández-García, 2021. "Lagrangian betweenness as a measure of bottlenecks in dynamical systems with oceanographic examples," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    6. Mazzarisi, P. & Barucca, P. & Lillo, F. & Tantari, D., 2020. "A dynamic network model with persistent links and node-specific latent variables, with an application to the interbank market," European Journal of Operational Research, Elsevier, vol. 281(1), pages 50-65.
    7. Sandra Hervías-Parejo & Mar Cuevas-Blanco & Lucas Lacasa & Anna Traveset & Isabel Donoso & Ruben Heleno & Manuel Nogales & Susana Rodríguez-Echeverría & Carlos J. Melián & Victor M. Eguíluz, 2024. "On the structure of species-function participation in multilayer ecological networks," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    8. Li, Baibing & Martin, Elaine B. & Morris, A. Julian, 2002. "On principal component analysis in L1," Computational Statistics & Data Analysis, Elsevier, vol. 40(3), pages 471-474, September.
    9. Ingo Scholtes & Nicolas Wider & René Pfitzner & Antonios Garas & Claudio J. Tessone & Frank Schweitzer, 2014. "Causality-driven slow-down and speed-up of diffusion in non-Markovian temporal networks," Nature Communications, Nature, vol. 5(1), pages 1-9, December.
    10. Peter Wills & François G Meyer, 2020. "Metrics for graph comparison: A practitioner’s guide," PLOS ONE, Public Library of Science, vol. 15(2), pages 1-54, February.
    11. Zhao, Longfeng & Wang, Gang-Jin & Wang, Mingang & Bao, Weiqi & Li, Wei & Stanley, H. Eugene, 2018. "Stock market as temporal network," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 506(C), pages 1104-1112.
    12. Manlio De Domenico & Vincenzo Nicosia & Alexandre Arenas & Vito Latora, 2015. "Structural reducibility of multilayer networks," Nature Communications, Nature, vol. 6(1), pages 1-9, November.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Luca Gallo & Lucas Lacasa & Vito Latora & Federico Battiston, 2024. "Higher-order correlations reveal complex memory in temporal hypergraphs," Nature Communications, Nature, vol. 15(1), pages 1-7, December.
    2. Li, Mingwu & Dankowicz, Harry, 2019. "Impact of temporal network structures on the speed of consensus formation in opinion dynamics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 523(C), pages 1355-1370.
    3. Panayotis Christidis & Álvaro Gomez Losada, 2019. "Email Based Institutional Network Analysis: Applications and Risks," Social Sciences, MDPI, vol. 8(11), pages 1-14, November.
    4. Rabbani, Fereshteh & Khraisha, Tamer & Abbasi, Fatemeh & Jafari, Gholam Reza, 2021. "Memory effects on link formation in temporal networks: A fractional calculus approach," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 564(C).
    5. Andrew Mellor, 2019. "Event Graphs: Advances And Applications Of Second-Order Time-Unfolded Temporal Network Models," Advances in Complex Systems (ACS), World Scientific Publishing Co. Pte. Ltd., vol. 22(03), pages 1-26, May.
    6. Lin, Xuhui & Chen, Long & Lu, Qiuchen & Zhao, Pengjun & Cheng, Tao, 2026. "Revealing higher-order interactions through multimodal irreversibility in flood-affected transportation networks," Reliability Engineering and System Safety, Elsevier, vol. 266(PA).
    7. Nie, Chun-Xiao, 2022. "Generalized correlation dimension and heterogeneity of network spaces," Chaos, Solitons & Fractals, Elsevier, vol. 162(C).
    8. Chen, Wei & Qu, Shuai & Jiang, Manrui & Jiang, Cheng, 2021. "The construction of multilayer stock network model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 565(C).
    9. Neil Hwang & Jiarui Xu & Shirshendu Chatterjee & Sharmodeep Bhattacharyya, 2022. "The Bethe Hessian and Information Theoretic Approaches for Online Change-Point Detection in Network Data," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 84(1), pages 283-320, June.
    10. Aming Li & Yang-Yu Liu, 2020. "Controlling Network Dynamics," Advances in Complex Systems (ACS), World Scientific Publishing Co. Pte. Ltd., vol. 22(07n08), pages 1-19, February.
    11. Lee, Sang Hoon & Holme, Petter, 2019. "Navigating temporal networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 513(C), pages 288-296.
    12. Juan Carlos Chávez & Felipe J. Fonseca & Manuel Gómez-Zaldívar, 2017. "Resoluciones de disputas comerciales y desempeño económico regional en México. (Commercial Disputes Resolution and Regional Economic Performance in Mexico)," Ensayos Revista de Economia, Universidad Autonoma de Nuevo Leon, Facultad de Economia, vol. 0(1), pages 79-93, May.
    13. Chen, Ray-Bing & Chen, Ying & Härdle, Wolfgang K., 2014. "TVICA—Time varying independent component analysis and its application to financial data," Computational Statistics & Data Analysis, Elsevier, vol. 74(C), pages 95-109.
    14. Yan Yu Chen & Chun-Cheih Chao & Fu-Chen Liu & Po-Chen Hsu & Hsueh-Fen Chen & Shih-Chi Peng & Yung-Jen Chuang & Chung-Yu Lan & Wen-Ping Hsieh & David Shan Hill Wong, 2013. "Dynamic Transcript Profiling of Candida albicans Infection in Zebrafish: A Pathogen-Host Interaction Study," PLOS ONE, Public Library of Science, vol. 8(9), pages 1-16, September.
    15. Plat, Richard, 2009. "Stochastic portfolio specific mortality and the quantification of mortality basis risk," Insurance: Mathematics and Economics, Elsevier, vol. 45(1), pages 123-132, August.
    16. Kondylis, Athanassios & Whittaker, Joe, 2008. "Spectral preconditioning of Krylov spaces: Combining PLS and PC regression," Computational Statistics & Data Analysis, Elsevier, vol. 52(5), pages 2588-2603, January.
    17. M. J. Aziakpono & S. Kleimeier & H. Sander, 2012. "Banking market integration in the SADC countries: evidence from interest rate analyses," Applied Economics, Taylor & Francis Journals, vol. 44(29), pages 3857-3876, October.
    18. Bianca Maria Colosimo & Luca Pagani & Marco Grasso, 2024. "Modeling spatial point processes in video-imaging via Ripley’s K-function: an application to spatter analysis in additive manufacturing," Journal of Intelligent Manufacturing, Springer, vol. 35(1), pages 429-447, January.
    19. Ouyang, Yaofu & Li, Peng, 2018. "On the nexus of financial development, economic growth, and energy consumption in China: New perspective from a GMM panel VAR approach," Energy Economics, Elsevier, vol. 71(C), pages 238-252.
    20. Fan, Cheng & Sun, Yongjun & Zhao, Yang & Song, Mengjie & Wang, Jiayuan, 2019. "Deep learning-based feature engineering methods for improved building energy prediction," Applied Energy, Elsevier, vol. 240(C), pages 35-45.

    More about this item

    Keywords

    ;
    ;
    ;
    ;
    ;

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:chsofr:v:199:y:2025:i:p1:s0960077925006125. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Thayer, Thomas R. (email available below). General contact details of provider: https://www.journals.elsevier.com/chaos-solitons-and-fractals .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.