IDEAS home Printed from https://ideas.repec.org/a/bla/jorssc/v68y2019i1p121-139.html
   My bibliography  Save this article

Informing a risk prediction model for binary outcomes with external coefficient information

Author

Listed:
  • Wenting Cheng
  • Jeremy M. G. Taylor
  • Tian Gu
  • Scott A. Tomlins
  • Bhramar Mukherjee

Abstract

We consider a situation where rich historical data are available for the coefficients and their standard errors in an established regression model describing the association between a binary outcome variable Y and a set of predicting factors X, from a large study. We would like to utilize this summary information for improving estimation and prediction in an expanded model of interest, Y|X,B. The additional variable B is a new biomarker, measured on a small number of subjects in a new data set. We develop and evaluate several approaches for translating the external information into constraints on regression coefficients in a logistic regression model of Y|X,B. Borrowing from the measurement error literature we establish an approximate relationship between the regression coefficients in the models Pr(Y=1|X,β), Pr(Y=1|X,B,γ) and E(B|X,θ) for a Gaussian distribution of B. For binary B we propose an alternative expression. The simulation results comparing these methods indicate that historical information on Pr(Y=1|X,β) can improve the efficiency of estimation and enhance the predictive power in the regression model of interest Pr(Y=1|X,B,γ). We illustrate our methodology by enhancing the high grade prostate cancer prevention trial risk calculator, with two new biomarkers: prostate cancer antigen 3 and TMPRSS2:ERG.

Suggested Citation

  • Wenting Cheng & Jeremy M. G. Taylor & Tian Gu & Scott A. Tomlins & Bhramar Mukherjee, 2019. "Informing a risk prediction model for binary outcomes with external coefficient information," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 68(1), pages 121-139, January.
  • Handle: RePEc:bla:jorssc:v:68:y:2019:i:1:p:121-139
    DOI: 10.1111/rssc.12306
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/rssc.12306
    Download Restriction: no

    File URL: https://libkey.io/10.1111/rssc.12306?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:jorssc:v:68:y:2019:i:1:p:121-139. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: https://edirc.repec.org/data/rssssea.html .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.