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Nonparametric Bayes Modeling of Populations of Networks

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  • Daniele Durante
  • David B. Dunson
  • Joshua T. Vogelstein

Abstract

Replicated network data are increasingly available in many research fields. For example, in connectomic applications, interconnections among brain regions are collected for each patient under study, motivating statistical models which can flexibly characterize the probabilistic generative mechanism underlying these network-valued data. Available models for a single network are not designed specifically for inference on the entire probability mass function of a network-valued random variable and therefore lack flexibility in characterizing the distribution of relevant topological structures. We propose a flexible Bayesian nonparametric approach for modeling the population distribution of network-valued data. The joint distribution of the edges is defined via a mixture model that reduces dimensionality and efficiently incorporates network information within each mixture component by leveraging latent space representations. The formulation leads to an efficient Gibbs sampler and provides simple and coherent strategies for inference and goodness-of-fit assessments. We provide theoretical results on the flexibility of our model and illustrate improved performance—compared to state-of-the-art models—in simulations and application to human brain networks. Supplementary materials for this article are available online.

Suggested Citation

  • Daniele Durante & David B. Dunson & Joshua T. Vogelstein, 2017. "Nonparametric Bayes Modeling of Populations of Networks," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(520), pages 1516-1530, October.
  • Handle: RePEc:taf:jnlasa:v:112:y:2017:i:520:p:1516-1530
    DOI: 10.1080/01621459.2016.1219260
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    References listed on IDEAS

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    1. Silvia D'Angelo & Marco Alfò & Thomas Brendan Murphy, 2020. "Modeling node heterogeneity in latent space models for multidimensional networks," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 74(3), pages 324-341, August.
    2. Laleh Tafakori & Armin Pourkhanali & Riccardo Rastelli, 2022. "Measuring systemic risk and contagion in the European financial network," Empirical Economics, Springer, vol. 63(1), pages 345-389, July.
    3. Lovato, Ilenia & Pini, Alessia & Stamm, Aymeric & Vantini, Simone, 2020. "Model-free two-sample test for network-valued data," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).
    4. Chung, Jaewon & Bridgeford, Eric & Arroyo, Jesus & Pedigo, Benjamin D. & Saad-Eldin, Ali & Gopalakrishnan, Vivek & Xiang, Liang & Priebe, Carey E. & Vogelstein, Joshua T., 2020. "Statistical Connectomics," OSF Preprints ek4n3, Center for Open Science.
    5. Linardi, Fernando & Diks, Cees & van der Leij, Marco & Lazier, Iuri, 2020. "Dynamic interbank network analysis using latent space models," Journal of Economic Dynamics and Control, Elsevier, vol. 112(C).
    6. Ilenia Lovato & Alessia Pini & Aymeric Stamm & Maxime Taquet & Simone Vantini, 2021. "Multiscale null hypothesis testing for network‐valued data: Analysis of brain networks of patients with autism," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 70(2), pages 372-397, March.

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