IDEAS home Printed from https://ideas.repec.org/a/spr/sankha/v81y2019i2d10.1007_s13171-018-0134-x.html
   My bibliography  Save this article

Compressed Covariance Estimation with Automated Dimension Learning

Author

Listed:
  • Gautam Sabnis

    (University of Michigan)

  • Debdeep Pati

    (Texas A&M University)

  • Anirban Bhattacharya

    (Texas A&M University)

Abstract

We propose a method for estimating a covariance matrix that can be represented as a sum of a low-rank matrix and a diagonal matrix. The proposed method compresses high-dimensional data, computes the sample covariance in the compressed space, and lifts it back to the ambient space via a decompression operation. A salient feature of our approach relative to existing literature on combining sparsity and low-rank structures in covariance matrix estimation is that we do not require the low-rank component to be sparse. A principled framework for estimating the compressed dimension using Stein’s Unbiased Risk Estimation theory is demonstrated. Experimental simulation results demonstrate the efficacy and scalability of our proposed approach.

Suggested Citation

  • Gautam Sabnis & Debdeep Pati & Anirban Bhattacharya, 2019. "Compressed Covariance Estimation with Automated Dimension Learning," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 81(2), pages 466-481, December.
  • Handle: RePEc:spr:sankha:v:81:y:2019:i:2:d:10.1007_s13171-018-0134-x
    DOI: 10.1007/s13171-018-0134-x
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s13171-018-0134-x
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s13171-018-0134-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Gerardo Jimenez-Sanchez & Barton Childs & David Valle, 2001. "Human disease genes," Nature, Nature, vol. 409(6822), pages 853-855, February.
    2. Ledoit, Olivier & Wolf, Michael, 2004. "A well-conditioned estimator for large-dimensional covariance matrices," Journal of Multivariate Analysis, Elsevier, vol. 88(2), pages 365-411, February.
    3. Jianqing Fan & Yuan Liao & Martina Mincheva, 2013. "Large covariance estimation by thresholding principal orthogonal complements," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 75(4), pages 603-680, September.
    4. Shen, Haipeng & Huang, Jianhua Z., 2008. "Sparse principal component analysis via regularized low rank matrix approximation," Journal of Multivariate Analysis, Elsevier, vol. 99(6), pages 1015-1034, July.
    5. Kaufman, Cari G. & Schervish, Mark J. & Nychka, Douglas W., 2008. "Covariance Tapering for Likelihood-Based Estimation in Large Spatial Data Sets," Journal of the American Statistical Association, American Statistical Association, vol. 103(484), pages 1545-1555.
    6. Olivier Ledoit & Pedro Santa-Clara & Michael Wolf, 2003. "Flexible Multivariate GARCH Modeling with an Application to International Stock Markets," The Review of Economics and Statistics, MIT Press, vol. 85(3), pages 735-747, August.
    7. Yi, Feng & Zou, Hui, 2013. "SURE-tuned tapering estimation of large covariance matrices," Computational Statistics & Data Analysis, Elsevier, vol. 58(C), pages 339-351.
    8. Ming Yuan & Yi Lin, 2007. "Model selection and estimation in the Gaussian graphical model," Biometrika, Biometrika Trust, vol. 94(1), pages 19-35.
    9. Smith M. & Kohn R., 2002. "Parsimonious Covariance Matrix Estimation for Longitudinal Data," Journal of the American Statistical Association, American Statistical Association, vol. 97, pages 1141-1153, December.
    10. Jushan Bai & Shuzhong Shi, 2011. "Estimating High Dimensional Covariance Matrices and its Applications," Annals of Economics and Finance, Society for AEF, vol. 12(2), pages 199-215, November.
    11. Jianhua Z. Huang & Naiping Liu & Mohsen Pourahmadi & Linxu Liu, 2006. "Covariance matrix selection and estimation via penalised normal likelihood," Biometrika, Biometrika Trust, vol. 93(1), pages 85-98, March.
    12. Peter D. Hoff, 2009. "A hierarchical eigenmodel for pooled covariance estimation," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 71(5), pages 971-992, November.
    13. Jianqing Fan & Yuan Liao & Han Liu, 2016. "An overview of the estimation of large covariance and precision matrices," Econometrics Journal, Royal Economic Society, vol. 19(1), pages 1-32, February.
    14. Schäfer Juliane & Strimmer Korbinian, 2005. "A Shrinkage Approach to Large-Scale Covariance Matrix Estimation and Implications for Functional Genomics," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 4(1), pages 1-32, November.
    15. Cai, Tony & Liu, Weidong, 2011. "Adaptive Thresholding for Sparse Covariance Matrix Estimation," Journal of the American Statistical Association, American Statistical Association, vol. 106(494), pages 672-684.
    16. Wei Biao Wu, 2003. "Nonparametric estimation of large covariance matrices of longitudinal data," Biometrika, Biometrika Trust, vol. 90(4), pages 831-844, December.
    17. Timothy L. McMurry & Dimitris N. Politis, 2010. "Banded and tapered estimates for autocovariance matrices and the linear process bootstrap," Journal of Time Series Analysis, Wiley Blackwell, vol. 31(6), pages 471-482, November.
    18. Lam, Clifford & Fan, Jianqing, 2009. "Sparsistency and rates of convergence in large covariance matrix estimation," LSE Research Online Documents on Economics 31540, London School of Economics and Political Science, LSE Library.
    19. Furrer, Reinhard & Bengtsson, Thomas, 2007. "Estimation of high-dimensional prior and posterior covariance matrices in Kalman filter variants," Journal of Multivariate Analysis, Elsevier, vol. 98(2), pages 227-255, February.
    20. A. Bhattacharya & D. B. Dunson, 2011. "Sparse Bayesian infinite factor models," Biometrika, Biometrika Trust, vol. 98(2), pages 291-306.
    21. Rothman, Adam J. & Levina, Elizaveta & Zhu, Ji, 2009. "Generalized Thresholding of Large Covariance Matrices," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 177-186.
    22. D. Goldfarb & G. Iyengar, 2003. "Robust Portfolio Selection Problems," Mathematics of Operations Research, INFORMS, vol. 28(1), pages 1-38, February.
    23. Fan, Jianqing & Fan, Yingying & Lv, Jinchi, 2008. "High dimensional covariance matrix estimation using a factor model," Journal of Econometrics, Elsevier, vol. 147(1), pages 186-197, November.
    24. McMurry, Timothy L & Politis, D N, 2010. "Banded and Tapered Estimates for Autocovariance Matrices and the Linear Process Bootstrap," University of California at San Diego, Economics Working Paper Series qt5h9259mb, Department of Economics, UC San Diego.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Lam, Clifford, 2020. "High-dimensional covariance matrix estimation," LSE Research Online Documents on Economics 101667, London School of Economics and Political Science, LSE Library.
    2. Bailey, Natalia & Pesaran, M. Hashem & Smith, L. Vanessa, 2019. "A multiple testing approach to the regularisation of large sample correlation matrices," Journal of Econometrics, Elsevier, vol. 208(2), pages 507-534.
    3. Abadir, Karim M. & Distaso, Walter & Žikeš, Filip, 2014. "Design-free estimation of variance matrices," Journal of Econometrics, Elsevier, vol. 181(2), pages 165-180.
    4. Jianqing Fan & Yuan Liao & Martina Mincheva, 2013. "Large covariance estimation by thresholding principal orthogonal complements," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 75(4), pages 603-680, September.
    5. Jianqing Fan & Yuan Liao & Han Liu, 2016. "An overview of the estimation of large covariance and precision matrices," Econometrics Journal, Royal Economic Society, vol. 19(1), pages 1-32, February.
    6. Chen, Jia & Li, Degui & Linton, Oliver, 2019. "A new semiparametric estimation approach for large dynamic covariance matrices with multiple conditioning variables," Journal of Econometrics, Elsevier, vol. 212(1), pages 155-176.
    7. Huang, Na & Fryzlewicz, Piotr, 2018. "NOVELIST estimator of large correlation and covariance matrices and their inverses," LSE Research Online Documents on Economics 89055, London School of Economics and Political Science, LSE Library.
    8. Ruili Sun & Tiefeng Ma & Shuangzhe Liu & Milind Sathye, 2019. "Improved Covariance Matrix Estimation for Portfolio Risk Measurement: A Review," JRFM, MDPI, vol. 12(1), pages 1-34, March.
    9. Ikeda, Yuki & Kubokawa, Tatsuya & Srivastava, Muni S., 2016. "Comparison of linear shrinkage estimators of a large covariance matrix in normal and non-normal distributions," Computational Statistics & Data Analysis, Elsevier, vol. 95(C), pages 95-108.
    10. Na Huang & Piotr Fryzlewicz, 2019. "NOVELIST estimator of large correlation and covariance matrices and their inverses," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(3), pages 694-727, September.
    11. Xi Luo, 2011. "Recovering Model Structures from Large Low Rank and Sparse Covariance Matrix Estimation," Papers 1111.1133, arXiv.org, revised Mar 2013.
    12. Yuki Ikeda & Tatsuya Kubokawa, 2015. "Linear Shrinkage Estimation of Large Covariance Matrices with Use of Factor Models," CIRJE F-Series CIRJE-F-958, CIRJE, Faculty of Economics, University of Tokyo.
    13. Chen, Shuo & Kang, Jian & Xing, Yishi & Zhao, Yunpeng & Milton, Donald K., 2018. "Estimating large covariance matrix with network topology for high-dimensional biomedical data," Computational Statistics & Data Analysis, Elsevier, vol. 127(C), pages 82-95.
    14. Sung, Bongjung & Lee, Jaeyong, 2023. "Covariance structure estimation with Laplace approximation," Journal of Multivariate Analysis, Elsevier, vol. 198(C).
    15. Konrad Furmańczyk, 2021. "Estimation of autocovariance matrices for high dimensional linear processes," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 84(4), pages 595-613, May.
    16. Wang, Hanchao & Peng, Bin & Li, Degui & Leng, Chenlei, 2021. "Nonparametric estimation of large covariance matrices with conditional sparsity," Journal of Econometrics, Elsevier, vol. 223(1), pages 53-72.
    17. Yumou Qiu & Song Xi Chen, 2015. "Bandwidth Selection for High-Dimensional Covariance Matrix Estimation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(511), pages 1160-1174, September.
    18. Shaoxin Wang & Hu Yang & Chaoli Yao, 2019. "On the penalized maximum likelihood estimation of high-dimensional approximate factor model," Computational Statistics, Springer, vol. 34(2), pages 819-846, June.
    19. Farnè, Matteo & Montanari, Angela, 2020. "A large covariance matrix estimator under intermediate spikiness regimes," Journal of Multivariate Analysis, Elsevier, vol. 176(C).
    20. Lam, Clifford, 2008. "Estimation of large precision matrices through block penalization," LSE Research Online Documents on Economics 31543, London School of Economics and Political Science, LSE Library.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:sankha:v:81:y:2019:i:2:d:10.1007_s13171-018-0134-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.