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Efficient Bayesian estimation of multivariate state space models

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  • Strickland, Chris M.
  • Turner, Ian. W.
  • Denham, Robert
  • Mengersen, Kerrie L.

Abstract

A Bayesian Markov chain Monte Carlo methodology is developed for the estimation of multivariate linear Gaussian state space models. In particular, an efficient simulation smoothing algorithm is proposed that makes use of the univariate representation of the state space model. Substantial gains over existing algorithms in computational efficiency are achieved using the new simulation smoother for the analysis of high dimensional multivariate time series. The methodology is used to analyse a multivariate time series dataset of the Normalised Difference Vegetation Index (NDVI), which is a proxy for the level of live vegetation, for a particular grazing property located in Queensland, Australia.

Suggested Citation

  • Strickland, Chris M. & Turner, Ian. W. & Denham, Robert & Mengersen, Kerrie L., 2009. "Efficient Bayesian estimation of multivariate state space models," Computational Statistics & Data Analysis, Elsevier, vol. 53(12), pages 4116-4125, October.
    • Handle: RePEc:eee:csdana:v:53:y:2009:i:12:p:4116-4125
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    References listed on IDEAS

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    1. Strickland, Chris M. & Martin, Gael M. & Forbes, Catherine S., 2008. "Parameterisation and efficient MCMC estimation of non-Gaussian state space models," Computational Statistics & Data Analysis, Elsevier, vol. 52(6), pages 2911-2930, February.
    2. Chib, Siddhartha & Greenberg, Edward, 1996. "Markov Chain Monte Carlo Simulation Methods in Econometrics," Econometric Theory, Cambridge University Press, vol. 12(3), pages 409-431, August.
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    5. Strickland, Chris M. & Forbes, Catherine S. & Martin, Gael M., 2006. "Bayesian analysis of the stochastic conditional duration model," Computational Statistics & Data Analysis, Elsevier, vol. 50(9), pages 2247-2267, May.
    6. Andrews, Donald W K, 1991. "Heteroskedasticity and Autocorrelation Consistent Covariance Matrix Estimation," Econometrica, Econometric Society, vol. 59(3), pages 817-858, May.
    7. Durbin, James & Koopman, Siem Jan, 2012. "Time Series Analysis by State Space Methods," OUP Catalogue, Oxford University Press, edition 2, number 9780199641178, Decembrie.
    8. Charles Bos & Neil Shephard, 2006. "Inference for Adaptive Time Series Models: Stochastic Volatility and Conditionally Gaussian State Space Form," Econometric Reviews, Taylor & Francis Journals, vol. 25(2-3), pages 219-244.
    9. Fernandez, F Javier & Harvey, Andrew C, 1990. "Seemingly Unrelated Time Series Equations and a Test for Homogeneity," Journal of Business & Economic Statistics, American Statistical Association, vol. 8(1), pages 71-81, January.
    10. S. J. Koopman & J. Durbin, 2000. "Fast Filtering and Smoothing for Multivariate State Space Models," Journal of Time Series Analysis, Wiley Blackwell, vol. 21(3), pages 281-296, May.
    11. Sangjoon Kim & Neil Shephard & Siddhartha Chib, 1998. "Stochastic Volatility: Likelihood Inference and Comparison with ARCH Models," The Review of Economic Studies, Review of Economic Studies Ltd, vol. 65(3), pages 361-393.
    12. Harvey, Andrew C. & Trimbur, Thomas M. & Van Dijk, Herman K., 2007. "Trends and cycles in economic time series: A Bayesian approach," Journal of Econometrics, Elsevier, vol. 140(2), pages 618-649, October.
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    Cited by:

    1. Ouysse, Rachida & Kohn, Robert, 2010. "Bayesian variable selection and model averaging in the arbitrage pricing theory model," Computational Statistics & Data Analysis, Elsevier, vol. 54(12), pages 3249-3268, December.
    2. Strid, Ingvar, 2010. "Efficient parallelisation of Metropolis-Hastings algorithms using a prefetching approach," Computational Statistics & Data Analysis, Elsevier, vol. 54(11), pages 2814-2835, November.
    3. repec:jss:jstsof:39:i02 is not listed on IDEAS
    4. Strickland, Christopher & Burdett, Robert & Mengersen, Kerrie & Denham, Robert, 2014. "PySSM: A Python Module for Bayesian Inference of Linear Gaussian State Space Models," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 57(i06).

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