IDEAS home Printed from https://ideas.repec.org/a/spr/compst/v35y2020i3d10.1007_s00180-019-00926-7.html
   My bibliography  Save this article

An efficient dimension reduction for the Gaussian process emulation of two nested codes with functional outputs

Author

Listed:
  • Sophie Marque-Pucheu

    (CEA/DAM/DIF
    Université Paris Diderot)

  • Guillaume Perrin

    (CEA/DAM/DIF)

  • Josselin Garnier

    (Ecole Polytechnique)

Abstract

In this paper, we first propose an efficient method for the dimension reduction of the functional input of a code with functional output. It is based on the approximation of the output by a model which is linear with respect to the functional input. This approximation has a sparse structure, whose parameters can be accurately estimated from a small set of observations of the code. The Gaussian predictor based on this projection basis is significantly more accurate than the one based on a projection obtained with Partial Least Squares. Secondly, the surrogate modeling of two nested codes with functional outputs is considered. In such a case, the functional output of the first code is one of the inputs of the second code. The Gaussian process regression of the second code is performed using the proposed dimension reduction. A Gaussian predictor of the nested code is obtained by composing the predictors of the two codes and linearizing this composition. Moreover, two sequential design criteria are proposed. Since we aim at performing a sensitivity analysis, these criteria are based on a minimization of the prediction variance. Moreover, one of the criteria enables to choose, if it is possible, which of the two codes to run. Thus, the computational budget is optimally allocated between the two codes and the prediction error is substantially reduced.

Suggested Citation

  • Sophie Marque-Pucheu & Guillaume Perrin & Josselin Garnier, 2020. "An efficient dimension reduction for the Gaussian process emulation of two nested codes with functional outputs," Computational Statistics, Springer, vol. 35(3), pages 1059-1099, September.
  • Handle: RePEc:spr:compst:v:35:y:2020:i:3:d:10.1007_s00180-019-00926-7
    DOI: 10.1007/s00180-019-00926-7
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s00180-019-00926-7
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s00180-019-00926-7?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. S. Conti & J. P. Gosling & J. E. Oakley & A. O'Hagan, 2009. "Gaussian process emulation of dynamic computer codes," Biometrika, Biometrika Trust, vol. 96(3), pages 663-676.
    2. Simon Nanty & Céline Helbert & Amandine Marrel & Nadia Pérot & Clémentine Prieur, 2017. "Uncertainty quantification for functional dependent random variables," Computational Statistics, Springer, vol. 32(2), pages 559-583, June.
    3. Higdon, Dave & Gattiker, James & Williams, Brian & Rightley, Maria, 2008. "Computer Model Calibration Using High-Dimensional Output," Journal of the American Statistical Association, American Statistical Association, vol. 103, pages 570-583, June.
    4. Carl Eckart & Gale Young, 1936. "The approximation of one matrix by another of lower rank," Psychometrika, Springer;The Psychometric Society, vol. 1(3), pages 211-218, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Nott, David J. & Marshall, Lucy & Fielding, Mark & Liong, Shie-Yui, 2014. "Mixtures of experts for understanding model discrepancy in dynamic computer models," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 491-505.
    2. Jackson Samuel E. & Vernon Ian & Liu Junli & Lindsey Keith, 2020. "Understanding hormonal crosstalk in Arabidopsis root development via emulation and history matching," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 19(2), pages 1-33, April.
    3. Mohammadi, Hossein & Challenor, Peter & Goodfellow, Marc, 2019. "Emulating dynamic non-linear simulators using Gaussian processes," Computational Statistics & Data Analysis, Elsevier, vol. 139(C), pages 178-196.
    4. Sewell, Daniel K., 2018. "Visualizing data through curvilinear representations of matrices," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 255-270.
    5. Kohei Adachi & Nickolay T. Trendafilov, 2016. "Sparse principal component analysis subject to prespecified cardinality of loadings," Computational Statistics, Springer, vol. 31(4), pages 1403-1427, December.
    6. Norman Cliff, 1962. "Analytic rotation to a functional relationship," Psychometrika, Springer;The Psychometric Society, vol. 27(3), pages 283-295, September.
    7. Jushan Bai & Serena Ng, 2020. "Simpler Proofs for Approximate Factor Models of Large Dimensions," Papers 2008.00254, arXiv.org.
    8. Alfredo García-Hiernaux & José Casals & Miguel Jerez, 2012. "Estimating the system order by subspace methods," Computational Statistics, Springer, vol. 27(3), pages 411-425, September.
    9. Mitzi Cubilla‐Montilla & Ana‐Belén Nieto‐Librero & Ma Purificación Galindo‐Villardón & Ma Purificación Vicente Galindo & Isabel‐María Garcia‐Sanchez, 2019. "Are cultural values sufficient to improve stakeholder engagement human and labour rights issues?," Corporate Social Responsibility and Environmental Management, John Wiley & Sons, vol. 26(4), pages 938-955, July.
    10. Stegeman, Alwin, 2016. "A new method for simultaneous estimation of the factor model parameters, factor scores, and unique parts," Computational Statistics & Data Analysis, Elsevier, vol. 99(C), pages 189-203.
    11. Jos Berge & Henk Kiers, 1993. "An alternating least squares method for the weighted approximation of a symmetric matrix," Psychometrika, Springer;The Psychometric Society, vol. 58(1), pages 115-118, March.
    12. Shimeng Huang & Henry Wolkowicz, 2018. "Low-rank matrix completion using nuclear norm minimization and facial reduction," Journal of Global Optimization, Springer, vol. 72(1), pages 5-26, September.
    13. Antti J. Tanskanen & Jani Lukkarinen & Kari Vatanen, 2016. "Random selection of factors preserves the correlation structure in a linear factor model to a high degree," Papers 1604.05896, arXiv.org, revised Dec 2018.
    14. Ali Habibnia & Esfandiar Maasoumi, 2021. "Forecasting in Big Data Environments: An Adaptable and Automated Shrinkage Estimation of Neural Networks (AAShNet)," Journal of Quantitative Economics, Springer;The Indian Econometric Society (TIES), vol. 19(1), pages 363-381, December.
    15. Hemez, François M. & Atamturktur, Sezer, 2011. "The dangers of sparse sampling for the quantification of margin and uncertainty," Reliability Engineering and System Safety, Elsevier, vol. 96(9), pages 1220-1231.
    16. Jin-Xing Liu & Yong Xu & Chun-Hou Zheng & Yi Wang & Jing-Yu Yang, 2012. "Characteristic Gene Selection via Weighting Principal Components by Singular Values," PLOS ONE, Public Library of Science, vol. 7(7), pages 1-10, July.
    17. Drignei, Dorin, 2011. "A general statistical model for computer experiments with time series output," Reliability Engineering and System Safety, Elsevier, vol. 96(4), pages 460-467.
    18. Kargin, V. & Onatski, A., 2008. "Curve forecasting by functional autoregression," Journal of Multivariate Analysis, Elsevier, vol. 99(10), pages 2508-2526, November.
    19. Yoshio Takane & Forrest Young & Jan Leeuw, 1977. "Nonmetric individual differences multidimensional scaling: An alternating least squares method with optimal scaling features," Psychometrika, Springer;The Psychometric Society, vol. 42(1), pages 7-67, March.
    20. Aldrin, Magne, 1996. "Moderate projection pursuit regression for multivariate response data," Computational Statistics & Data Analysis, Elsevier, vol. 21(5), pages 501-531, May.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:compst:v:35:y:2020:i:3:d:10.1007_s00180-019-00926-7. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.