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Identifying Prototypical Components in Behaviour Using Clustering Algorithms

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  • Elke Braun
  • Bart Geurten
  • Martin Egelhaaf

Abstract

Quantitative analysis of animal behaviour is a requirement to understand the task solving strategies of animals and the underlying control mechanisms. The identification of repeatedly occurring behavioural components is thereby a key element of a structured quantitative description. However, the complexity of most behaviours makes the identification of such behavioural components a challenging problem. We propose an automatic and objective approach for determining and evaluating prototypical behavioural components. Behavioural prototypes are identified using clustering algorithms and finally evaluated with respect to their ability to represent the whole behavioural data set. The prototypes allow for a meaningful segmentation of behavioural sequences. We applied our clustering approach to identify prototypical movements of the head of blowflies during cruising flight. The results confirm the previously established saccadic gaze strategy by the set of prototypes being divided into either predominantly translational or rotational movements, respectively. The prototypes reveal additional details about the saccadic and intersaccadic flight sections that could not be unravelled so far. Successful application of the proposed approach to behavioural data shows its ability to automatically identify prototypical behavioural components within a large and noisy database and to evaluate these with respect to their quality and stability. Hence, this approach might be applied to a broad range of behavioural and neural data obtained from different animals and in different contexts.

Suggested Citation

  • Elke Braun & Bart Geurten & Martin Egelhaaf, 2010. "Identifying Prototypical Components in Behaviour Using Clustering Algorithms," PLOS ONE, Public Library of Science, vol. 5(2), pages 1-15, February.
  • Handle: RePEc:plo:pone00:0009361
    DOI: 10.1371/journal.pone.0009361
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    References listed on IDEAS

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    1. Zoubin Ghahramani, 2000. "Building blocks of movement," Nature, Nature, vol. 407(6805), pages 682-683, October.
    2. Greg J Stephens & Bethany Johnson-Kerner & William Bialek & William S Ryu, 2008. "Dimensionality and Dynamics in the Behavior of C. elegans," PLOS Computational Biology, Public Library of Science, vol. 4(4), pages 1-10, April.
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    Cited by:

    1. Andrea Censi & Andrew D Straw & Rosalyn W Sayaman & Richard M Murray & Michael H Dickinson, 2013. "Discriminating External and Internal Causes for Heading Changes in Freely Flying Drosophila," PLOS Computational Biology, Public Library of Science, vol. 9(2), pages 1-14, February.
    2. Olivier J N Bertrand & Jens P Lindemann & Martin Egelhaaf, 2015. "A Bio-inspired Collision Avoidance Model Based on Spatial Information Derived from Motion Detectors Leads to Common Routes," PLOS Computational Biology, Public Library of Science, vol. 11(11), pages 1-28, November.

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