IDEAS home Printed from https://ideas.repec.org/a/eee/jmvana/v175y2020ics0047259x19300168.html
   My bibliography  Save this article

Test for conditional independence with application to conditional screening

Author

Listed:
  • Zhou, Yeqing
  • Liu, Jingyuan
  • Zhu, Liping

Abstract

Measuring and testing conditional dependence are fundamental problems in statistics. Imposing mild conditions on Rosenblatt transformations (Rosenblatt, 1952), we establish an equivalence between the conditional and unconditional independence, which appears to be entirely irrelevant at the first glance. Such an equivalence allows us to convert the problem of testing conditional independence into the problem of testing unconditional independence. We further adopt the Blum–Kiefer–Rosenblatt correlation (Blum et al., 1961) to develop a test for conditional independence, which is powerful to capture nonlinear dependence and is robust to heavy-tailed errors. We obtain explicit forms for the asymptotic null distribution which involves no unknown tunings, rendering fast and easy implementation of our test for conditional independence. With this conditional independence test, we further propose a conditional screening method for high dimensional data to identify truly important covariates whose effects may vary with exposure variables. We use the false discovery rate to determine the screening cutoff. This screening approach possesses both the sure screening and the ranking consistency properties. We illustrate the finite sample performances through simulation studies and an application to the gene expression microarray dataset.

Suggested Citation

  • Zhou, Yeqing & Liu, Jingyuan & Zhu, Liping, 2020. "Test for conditional independence with application to conditional screening," Journal of Multivariate Analysis, Elsevier, vol. 175(C).
  • Handle: RePEc:eee:jmvana:v:175:y:2020:i:c:s0047259x19300168
    DOI: 10.1016/j.jmva.2019.104557
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0047259X19300168
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.jmva.2019.104557?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Jingyuan Liu & Runze Li & Rongling Wu, 2014. "Feature Selection for Varying Coefficient Models With Ultrahigh-Dimensional Covariates," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(505), pages 266-274, March.
    2. Su, Liangjun & White, Halbert, 2007. "A consistent characteristic function-based test for conditional independence," Journal of Econometrics, Elsevier, vol. 141(2), pages 807-834, December.
    3. Emre Barut & Jianqing Fan & Anneleen Verhasselt, 2016. "Conditional Sure Independence Screening," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(515), pages 1266-1277, July.
    4. Noah Simon & Robert Tibshirani, 2015. "A Permutation Approach to Testing Interactions for Binary Response by Comparing Correlations Between Classes," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(512), pages 1707-1716, December.
    5. Su, Liangjun & White, Halbert, 2008. "A Nonparametric Hellinger Metric Test For Conditional Independence," Econometric Theory, Cambridge University Press, vol. 24(4), pages 829-864, August.
    6. Su, Liangjun & White, Halbert, 2014. "Testing conditional independence via empirical likelihood," Journal of Econometrics, Elsevier, vol. 182(1), pages 27-44.
    7. Runze Li & Wei Zhong & Liping Zhu, 2012. "Feature Screening via Distance Correlation Learning," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(499), pages 1129-1139, September.
    8. Jianqing Fan & Yunbei Ma & Wei Dai, 2014. "Nonparametric Independence Screening in Sparse Ultra-High-Dimensional Varying Coefficient Models," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(507), pages 1270-1284, September.
    9. Shujie Ma & Runze Li & Chih-Ling Tsai, 2017. "Variable Screening via Quantile Partial Correlation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(518), pages 650-663, April.
    10. Wang, Hansheng & Xia, Yingcun, 2009. "Shrinkage Estimation of the Varying Coefficient Model," Journal of the American Statistical Association, American Statistical Association, vol. 104(486), pages 747-757.
    11. Liping Zhu & Kai Xu & Runze Li & Wei Zhong, 2017. "Projection correlation between two random vectors," Biometrika, Biometrika Trust, vol. 104(4), pages 829-843.
    12. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    13. Xueqin Wang & Wenliang Pan & Wenhao Hu & Yuan Tian & Heping Zhang, 2015. "Conditional Distance Correlation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(512), pages 1726-1734, December.
    14. Wang, Xia & Hong, Yongmiao, 2018. "Characteristic Function Based Testing For Conditional Independence: A Nonparametric Regression Approach," Econometric Theory, Cambridge University Press, vol. 34(4), pages 815-849, August.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Yuyang Liu & Pengfei Pi & Shan Luo, 2023. "A semi-parametric approach to feature selection in high-dimensional linear regression models," Computational Statistics, Springer, vol. 38(2), pages 979-1000, June.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Ke, Chenlu & Yang, Wei & Yuan, Qingcong & Li, Lu, 2023. "Partial sufficient variable screening with categorical controls," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
    2. Lu, Jun & Lin, Lu, 2018. "Feature screening for multi-response varying coefficient models with ultrahigh dimensional predictors," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 242-254.
    3. Xiaochao Xia & Hao Ming, 2022. "A Flexibly Conditional Screening Approach via a Nonparametric Quantile Partial Correlation," Mathematics, MDPI, vol. 10(24), pages 1-32, December.
    4. Zhang, Shucong & Zhou, Yong, 2018. "Variable screening for ultrahigh dimensional heterogeneous data via conditional quantile correlations," Journal of Multivariate Analysis, Elsevier, vol. 165(C), pages 1-13.
    5. Yi Liu & Qihua Wang, 2018. "Model-free feature screening for ultrahigh-dimensional data conditional on some variables," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 70(2), pages 283-301, April.
    6. Akira Shinkyu, 2023. "Forward Selection for Feature Screening and Structure Identification in Varying Coefficient Models," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 85(1), pages 485-511, February.
    7. Zhang, Shen & Zhao, Peixin & Li, Gaorong & Xu, Wangli, 2019. "Nonparametric independence screening for ultra-high dimensional generalized varying coefficient models with longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 37-52.
    8. Xuehu Zhu & Jun Lu & Jun Zhang & Lixing Zhu, 2021. "Testing for conditional independence: A groupwise dimension reduction‐based adaptive‐to‐model approach," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 48(2), pages 549-576, June.
    9. Yi Chu & Lu Lin, 2020. "Conditional SIRS for nonparametric and semiparametric models by marginal empirical likelihood," Statistical Papers, Springer, vol. 61(4), pages 1589-1606, August.
    10. Xiang-Jie Li & Xue-Jun Ma & Jing-Xiao Zhang, 2017. "Robust feature screening for varying coefficient models via quantile partial correlation," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 80(1), pages 17-49, January.
    11. Kong, Yinfei & Li, Yujie & Zerom, Dawit, 2019. "Screening and selection for quantile regression using an alternative measure of variable importance," Journal of Multivariate Analysis, Elsevier, vol. 173(C), pages 435-455.
    12. Jun Lu & Lu Lin, 2020. "Model-free conditional screening via conditional distance correlation," Statistical Papers, Springer, vol. 61(1), pages 225-244, February.
    13. Yuan, Qingcong & Chen, Xianyan & Ke, Chenlu & Yin, Xiangrong, 2022. "Independence index sufficient variable screening for categorical responses," Computational Statistics & Data Analysis, Elsevier, vol. 174(C).
    14. Jing Pan & Yuan Yu & Yong Zhou, 2018. "Nonparametric independence feature screening for ultrahigh-dimensional survival data," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 81(7), pages 821-847, October.
    15. Wang, Christina Dan & Chen, Zhao & Lian, Yimin & Chen, Min, 2022. "Asset selection based on high frequency Sharpe ratio," Journal of Econometrics, Elsevier, vol. 227(1), pages 168-188.
    16. Fan, Jianqing & Feng, Yang & Xia, Lucy, 2020. "A projection-based conditional dependence measure with applications to high-dimensional undirected graphical models," Journal of Econometrics, Elsevier, vol. 218(1), pages 119-139.
    17. Zhang, Shucong & Pan, Jing & Zhou, Yong, 2018. "Robust conditional nonparametric independence screening for ultrahigh-dimensional data," Statistics & Probability Letters, Elsevier, vol. 143(C), pages 95-101.
    18. Yang, Baoying & Yin, Xiangrong & Zhang, Nan, 2019. "Sufficient variable selection using independence measures for continuous response," Journal of Multivariate Analysis, Elsevier, vol. 173(C), pages 480-493.
    19. Xiaojun Song & Haoyu Wei, 2021. "Nonparametric Tests of Conditional Independence for Time Series," Papers 2110.04847, arXiv.org.
    20. Xia, Xiaochao & Yang, Hu & Li, Jialiang, 2016. "Feature screening for generalized varying coefficient models with application to dichotomous responses," Computational Statistics & Data Analysis, Elsevier, vol. 102(C), pages 85-97.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:jmvana:v:175:y:2020:i:c:s0047259x19300168. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/wps/find/journaldescription.cws_home/622892/description#description .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.