IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v222y2011i23p3869-3887.html
   My bibliography  Save this article

Modelling swimming aquatic animals in hydrodynamic models

Author

Listed:
  • Willis, Jay

Abstract

Aquatic life exists between very small passive floating objects such as spores, eggs or seeds which are at the mercy of currents through to animals which swim powerfully enough to overcome most natural currents. There is a corresponding scale of cognitive and sensory capability. Coupling hydrodynamic with Lagrangian particle modelling is well established, as is individual based modelling of animal behaviour. These areas have developed rapidly, due to availability of faster computers. These different disciplines have fundamentally different conceptual frameworks, but the combination of techniques offers an unparalleled opportunity to model swimming animals in water more accurately. More accurate models of dispersion, migration and other spatial dynamics would support a better informed ecosystem management and provide methods to define protected areas that are linked in coherent networks. Development plans for tidal power schemes and offshore wind farms mean that predictive models of migrating fish are needed urgently. Statistical models based on correlations become inaccurate as the environments move to previously unobserved states. This is where models based on rules such as individual based models have a unique advantage. I briefly review Eulerian, Lagrangian, coupled Eulerian–Lagrangian water models, water quality models and individual based models of animal movements, navigation and interactive behaviour.

Suggested Citation

  • Willis, Jay, 2011. "Modelling swimming aquatic animals in hydrodynamic models," Ecological Modelling, Elsevier, vol. 222(23), pages 3869-3887.
  • Handle: RePEc:eee:ecomod:v:222:y:2011:i:23:p:3869-3887
    DOI: 10.1016/j.ecolmodel.2011.10.004
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380011004893
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2011.10.004?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Zhang, Weitao & Arhonditsis, George B., 2009. "A Bayesian hierarchical framework for calibrating aquatic biogeochemical models," Ecological Modelling, Elsevier, vol. 220(18), pages 2142-2161.
    2. Stillman, Richard A., 2008. "MORPH—An individual-based model to predict the effect of environmental change on foraging animal populations," Ecological Modelling, Elsevier, vol. 216(3), pages 265-276.
    3. Lemasson, Bertrand H. & Haefner, James W. & Bowen, Mark D., 2008. "The effect of avoidance behavior on predicting fish passage rates through water diversion structures," Ecological Modelling, Elsevier, vol. 219(1), pages 178-188.
    4. Willis, Jay, 2008. "Simulation model of universal law of school size distribution applied to southern bluefin tuna (Thunnus maccoyii) in the Great Australian Bight," Ecological Modelling, Elsevier, vol. 213(1), pages 33-44.
    5. Viswanathan, G.M & Afanasyev, V & Buldyrev, Sergey V & Havlin, Shlomo & da Luz, M.G.E & Raposo, E.P & Stanley, H.Eugene, 2000. "Lévy flights in random searches," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 282(1), pages 1-12.
    6. Kakani Katija & John O. Dabiri, 2009. "A viscosity-enhanced mechanism for biogenic ocean mixing," Nature, Nature, vol. 460(7255), pages 624-626, July.
    7. Eric Bonabeau & Laurent Dagorn & Pierre Freon, 1999. "Scaling in Animal Group-Size Distributions," Working Papers 99-01-005, Santa Fe Institute.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Morrice, Katherine J. & Baptista, António M. & Burke, Brian J., 2020. "Environmental and behavioral controls on juvenile Chinook salmon migration pathways in the Columbia River estuary," Ecological Modelling, Elsevier, vol. 427(C).
    2. Lett, Christophe & Barrier, Nicolas & Bahlali, Meissam, 2020. "Converging approaches for modeling the dispersal of propagules in air and sea," Ecological Modelling, Elsevier, vol. 415(C).
    3. Rossington, Kate & Benson, Thomas, 2020. "An agent-based model to predict fish collisions with tidal stream turbines," Renewable Energy, Elsevier, vol. 151(C), pages 1220-1229.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. McLane, Adam J. & Semeniuk, Christina & McDermid, Gregory J. & Marceau, Danielle J., 2011. "The role of agent-based models in wildlife ecology and management," Ecological Modelling, Elsevier, vol. 222(8), pages 1544-1556.
    2. LaScala-Gruenewald, Diana E. & Mehta, Rohan S. & Liu, Yu & Denny, Mark W., 2019. "Sensory perception plays a larger role in foraging efficiency than heavy-tailed movement strategies," Ecological Modelling, Elsevier, vol. 404(C), pages 69-82.
    3. Skov, Henrik & Rasmussen, Erik Kock & Kotta, Jonne & Middelboe, Anne Lise & Uhrenholdt, Thomas & Žydelis, Ramunas, 2020. "Food web responses to eutrophication control in a coastal area of the Baltic Sea," Ecological Modelling, Elsevier, vol. 435(C).
    4. Garcia, Clement & Stillman, Richard A. & Forster, Rodney M. & Silva, Tiago & Bremner, Julie, 2016. "Nuclear power and coastal birds: Predicting the ecological consequences of warm-water outflows," Ecological Modelling, Elsevier, vol. 342(C), pages 60-81.
    5. Qi, Jie & Rong, Zhihai, 2013. "The emergence of scaling laws search dynamics in a particle swarm optimization," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(6), pages 1522-1531.
    6. Qianqian Liu & Qun Wang, 2017. "A comparative study on uncooperative search models in survivor search and rescue," Natural Hazards: Journal of the International Society for the Prevention and Mitigation of Natural Hazards, Springer;International Society for the Prevention and Mitigation of Natural Hazards, vol. 89(2), pages 843-857, November.
    7. O’Keeffe, Kevin & Santi, Paolo & Wang, Brandon & Ratti, Carlo, 2021. "Urban sensing as a random search process," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 562(C).
    8. Ringelman, Kevin M., 2014. "Predator foraging behavior and patterns of avian nest success: What can we learn from an agent-based model?," Ecological Modelling, Elsevier, vol. 272(C), pages 141-149.
    9. Jonathan U Harrison & Ruth E Baker, 2018. "The impact of temporal sampling resolution on parameter inference for biological transport models," PLOS Computational Biology, Public Library of Science, vol. 14(6), pages 1-30, June.
    10. Liu, Yancai & Cai, Rui & Duan, Jinqiao, 2019. "Lévy noise induced escape in the Morris–Lecar model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 531(C), pages 1-1.
    11. Yang, Likun & Zhao, Xinhua & Peng, Sen & Li, Xia, 2016. "Water quality assessment analysis by using combination of Bayesian and genetic algorithm approach in an urban lake, China," Ecological Modelling, Elsevier, vol. 339(C), pages 77-88.
    12. Juanico, Dranreb Earl & Monterola, Christopher & Saloma, Caesar, 2003. "Allelomimesis as a generic clustering mechanism for interacting agents," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 320(C), pages 590-600.
    13. Pirotta, Enrico & New, Leslie & Harwood, John & Lusseau, David, 2014. "Activities, motivations and disturbance: An agent-based model of bottlenose dolphin behavioral dynamics and interactions with tourism in Doubtful Sound, New Zealand," Ecological Modelling, Elsevier, vol. 282(C), pages 44-58.
    14. Shang, Lihui & Xu, Zhiqiang, 2023. "Adaptive control strategy improves synchronization of self-propelled agents," Applied Mathematics and Computation, Elsevier, vol. 454(C).
    15. Sepideh Bazazi & Frederic Bartumeus & Joseph J Hale & Iain D Couzin, 2012. "Intermittent Motion in Desert Locusts: Behavioural Complexity in Simple Environments," PLOS Computational Biology, Public Library of Science, vol. 8(5), pages 1-10, May.
    16. Matutinovic, Igor, 2001. "The aspects and the role of diversity in socioeconomic systems: an evolutionary perspective," Ecological Economics, Elsevier, vol. 39(2), pages 239-256, November.
    17. Lu, Xinbiao & Zhang, Chi & Qin, Buzhi, 2022. "An improved Vicsek model of swarm based on remote neighbors strategy," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 587(C).
    18. Danish A Ahmed & Ali R Ansari & Mudassar Imran & Kamal Dingle & Michael B Bonsall, 2021. "Mechanistic modelling of COVID-19 and the impact of lockdowns on a short-time scale," PLOS ONE, Public Library of Science, vol. 16(10), pages 1-20, October.
    19. de Kerckhove, Derrick T. & Shuter, Brian J., 2022. "Predation on schooling fish is shaped by encounters between prey during school formation using an Ideal Gas Model of animal movement," Ecological Modelling, Elsevier, vol. 470(C).
    20. Zielinski, D.P. & Hondzo, M. & Voller, V.R., 2014. "Mathematical evaluation of behavioral deterrent systems to disrupt fish movement," Ecological Modelling, Elsevier, vol. 272(C), pages 150-159.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:222:y:2011:i:23:p:3869-3887. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.