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Robust estimation of precision matrices under cellwise contamination

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  • Tarr, G.
  • Müller, S.
  • Weber, N.C.

Abstract

There is a great need for robust techniques in data mining and machine learning contexts where many standard techniques such as principal component analysis and linear discriminant analysis are inherently susceptible to outliers. Furthermore, standard robust procedures assume that less than half the observation rows of a data matrix are contaminated, which may not be a realistic assumption when the number of observed features is large. The problem of estimating covariance and precision matrices under cellwise contamination is investigated. The use of a robust pairwise covariance matrix as an input to various regularisation routines, such as the graphical lasso, QUIC and CLIME is considered. A method that transforms a symmetric matrix of pairwise covariances to the nearest covariance matrix is used to ensure the input covariance matrix is positive semidefinite. The result is a potentially sparse precision matrix that is resilient to moderate levels of cellwise contamination. Since this procedure is not based on subsampling it scales well as the number of variables increases.

Suggested Citation

  • Tarr, G. & Müller, S. & Weber, N.C., 2016. "Robust estimation of precision matrices under cellwise contamination," Computational Statistics & Data Analysis, Elsevier, vol. 93(C), pages 404-420.
  • Handle: RePEc:eee:csdana:v:93:y:2016:i:c:p:404-420
    DOI: 10.1016/j.csda.2015.02.005
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    1. Anders Løland & Ragnar Bang Huseby & Nils Lid Hjort & Arnoldo Frigessi, 2013. "Statistical Corrections of Invalid Correlation Matrices," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 40(4), pages 807-824, December.
    2. M. Hubert & P. Rousseeuw & K. Vakili, 2014. "Shape bias of robust covariance estimators: an empirical study," Statistical Papers, Springer, vol. 55(1), pages 15-28, February.
    3. Gottard, Anna & Pacillo, Simona, 2010. "Robust concentration graph model selection," Computational Statistics & Data Analysis, Elsevier, vol. 54(12), pages 3070-3079, December.
    4. Garth Tarr & Samuel Müller & Neville Weber, 2012. "A robust scale estimator based on pairwise means," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 24(1), pages 187-199.
    5. Filzmoser, Peter & Maronna, Ricardo & Werner, Mark, 2008. "Outlier identification in high dimensions," Computational Statistics & Data Analysis, Elsevier, vol. 52(3), pages 1694-1711, January.
    6. Cator, Eric A. & Lopuhaä, Hendrik P., 2010. "Asymptotic expansion of the minimum covariance determinant estimators," Journal of Multivariate Analysis, Elsevier, vol. 101(10), pages 2372-2388, November.
    7. Ma, Yanyuan & Genton, Marc G., 2001. "Highly Robust Estimation of Dispersion Matrices," Journal of Multivariate Analysis, Elsevier, vol. 78(1), pages 11-36, July.
    8. Ming Yuan & Yi Lin, 2007. "Model selection and estimation in the Gaussian graphical model," Biometrika, Biometrika Trust, vol. 94(1), pages 19-35.
    9. Van Aelst, S. & Vandervieren, E. & Willems, G., 2012. "A Stahel–Donoho estimator based on huberized outlyingness," Computational Statistics & Data Analysis, Elsevier, vol. 56(3), pages 531-542.
    10. Peter Filzmoser & Anne Ruiz-Gazen & Christine Thomas-Agnan, 2014. "Identification of local multivariate outliers," Statistical Papers, Springer, vol. 55(1), pages 29-47, February.
    11. Cai, Tony & Liu, Weidong & Luo, Xi, 2011. "A Constrained â„“1 Minimization Approach to Sparse Precision Matrix Estimation," Journal of the American Statistical Association, American Statistical Association, vol. 106(494), pages 594-607.
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