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Outcome†dependent sampling with interval†censored failure time data

Author

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  • Qingning Zhou
  • Jianwen Cai
  • Haibo Zhou

Abstract

Epidemiologic studies and disease prevention trials often seek to relate an exposure variable to a failure time that suffers from interval†censoring. When the failure rate is low and the time intervals are wide, a large cohort is often required so as to yield reliable precision on the exposure†failure†time relationship. However, large cohort studies with simple random sampling could be prohibitive for investigators with a limited budget, especially when the exposure variables are expensive to obtain. Alternative cost†effective sampling designs and inference procedures are therefore desirable. We propose an outcome†dependent sampling (ODS) design with interval†censored failure time data, where we enrich the observed sample by selectively including certain more informative failure subjects. We develop a novel sieve semiparametric maximum empirical likelihood approach for fitting the proportional hazards model to data from the proposed interval†censoring ODS design. This approach employs the empirical likelihood and sieve methods to deal with the infinite†dimensional nuisance parameters, which greatly reduces the dimensionality of the estimation problem and eases the computation difficulty. The consistency and asymptotic normality of the resulting regression parameter estimator are established. The results from our extensive simulation study show that the proposed design and method works well for practical situations and is more efficient than the alternative designs and competing approaches. An example from the Atherosclerosis Risk in Communities (ARIC) study is provided for illustration.

Suggested Citation

  • Qingning Zhou & Jianwen Cai & Haibo Zhou, 2018. "Outcome†dependent sampling with interval†censored failure time data," Biometrics, The International Biometric Society, vol. 74(1), pages 58-67, March.
  • Handle: RePEc:bla:biomet:v:74:y:2018:i:1:p:58-67
    DOI: 10.1111/biom.12744
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    1. Wang, J. & Ghosh, S.K., 2012. "Shape restricted nonparametric regression with Bernstein polynomials," Computational Statistics & Data Analysis, Elsevier, vol. 56(9), pages 2729-2741.
    2. Zhiguo Li & Peter Gilbert & Bin Nan, 2008. "Weighted Likelihood Method for Grouped Survival Data in Case–Cohort Studies with Application to HIV Vaccine Trials," Biometrics, The International Biometric Society, vol. 64(4), pages 1247-1255, December.
    3. Wenbin Lu & Anastasios A. Tsiatis, 2006. "Semiparametric transformation models for the case-cohort study," Biometrika, Biometrika Trust, vol. 93(1), pages 207-214, March.
    4. Rui Song & Haibo Zhou & Michael R. Kosorok, 2009. "A note on semiparametric efficient inference for two-stage outcome-dependent sampling with a continuous outcome," Biometrika, Biometrika Trust, vol. 96(1), pages 221-228.
    5. Lan Kong & Jianwen Cai, 2009. "Case–Cohort Analysis with Accelerated Failure Time Model," Biometrics, The International Biometric Society, vol. 65(1), pages 135-142, March.
    6. Donglin Zeng & D. Y. Lin, 2014. "Efficient Estimation of Semiparametric Transformation Models for Two-Phase Cohort Studies," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(505), pages 371-383, March.
    7. Norman E. Breslow & Jon A. Wellner, 2007. "Weighted Likelihood for Semiparametric Models and Two‐phase Stratified Samples, with Application to Cox Regression," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 34(1), pages 86-102, March.
    8. Jianwen Cai & Donglin Zeng, 2007. "Power Calculation for Case–Cohort Studies with Nonrare Events," Biometrics, The International Biometric Society, vol. 63(4), pages 1288-1295, December.
    9. S. Kang & J. Cai, 2009. "Marginal hazards model for case-cohort studies with multiple disease outcomes," Biometrika, Biometrika Trust, vol. 96(4), pages 887-901.
    10. Chatterjee N. & Chen Y-H. & Breslow N.E., 2003. "A Pseudoscore Estimator for Regression Problems With Two-Phase Sampling," Journal of the American Statistical Association, American Statistical Association, vol. 98, pages 158-168, January.
    11. Ying Zhang & Lei Hua & Jian Huang, 2010. "A Spline‐Based Semiparametric Maximum Likelihood Estimation Method for the Cox Model with Interval‐Censored Data," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 37(2), pages 338-354, June.
    12. Wei Pan, 2000. "A Multiple Imputation Approach to Cox Regression with Interval-Censored Data," Biometrics, The International Biometric Society, vol. 56(1), pages 199-203, March.
    13. Haibo Zhou & Rui Song & Yuanshan Wu & Jing Qin, 2011. "Statistical Inference for a Two-Stage Outcome-Dependent Sampling Design with a Continuous Outcome," Biometrics, The International Biometric Society, vol. 67(1), pages 194-202, March.
    14. Lianming Wang & Christopher S. McMahan & Michael G. Hudgens & Zaina P. Qureshi, 2016. "A flexible, computationally efficient method for fitting the proportional hazards model to interval-censored data," Biometrics, The International Biometric Society, vol. 72(1), pages 222-231, March.
    15. Weaver, Mark A. & Zhou, Haibo, 2005. "An Estimated Likelihood Method for Continuous Outcome Regression Models With Outcome-Dependent Sampling," Journal of the American Statistical Association, American Statistical Association, vol. 100, pages 459-469, June.
    16. Donglin Zeng & Lu Mao & D. Y. Lin, 2016. "Maximum likelihood estimation for semiparametric transformation models with interval-censored data," Biometrika, Biometrika Trust, vol. 103(2), pages 253-271.
    17. Jieli Ding & Tsui-Shan Lu & Jianwen Cai & Haibo Zhou, 2017. "Recent progresses in outcome-dependent sampling with failure time data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(1), pages 57-82, January.
    18. Q. Zhou & H. Zhou & J. Cai, 2017. "Case-cohort studies with interval-censored failure time data," Biometrika, Biometrika Trust, vol. 104(1), pages 17-29.
    19. Haibo Zhou & M. A. Weaver & J. Qin & M. P. Longnecker & M. C. Wang, 2002. "A Semiparametric Empirical Likelihood Method for Data from an Outcome-Dependent Sampling Scheme with a Continuous Outcome," Biometrics, The International Biometric Society, vol. 58(2), pages 413-421, June.
    20. Qingning Zhou & Tao Hu & Jianguo Sun, 2017. "A Sieve Semiparametric Maximum Likelihood Approach for Regression Analysis of Bivariate Interval-Censored Failure Time Data," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(518), pages 664-672, April.
    21. Alice S. Whittemore, 1997. "Multistage Sampling Designs and Estimating Equations," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 59(3), pages 589-602.
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