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Network-Based Penalized Regression With Application to Genomic Data

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  • Sunkyung Kim
  • Wei Pan
  • Xiaotong Shen

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Suggested Citation

  • Sunkyung Kim & Wei Pan & Xiaotong Shen, 2013. "Network-Based Penalized Regression With Application to Genomic Data," Biometrics, The International Biometric Society, vol. 69(3), pages 582-593, September.
  • Handle: RePEc:bla:biomet:v:69:y:2013:i:3:p:582-593
    DOI: 10.1111/biom.12035
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    References listed on IDEAS

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    1. Robert Tibshirani & Michael Saunders & Saharon Rosset & Ji Zhu & Keith Knight, 2005. "Sparsity and smoothness via the fused lasso," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(1), pages 91-108, February.
    2. Wei Pan & Benhuai Xie & Xiaotong Shen, 2010. "Incorporating Predictor Network in Penalized Regression with Application to Microarray Data," Biometrics, The International Biometric Society, vol. 66(2), pages 474-484, June.
    3. Shen, Xiaotong & Huang, Hsin-Cheng, 2010. "Grouping Pursuit Through a Regularization Solution Surface," Journal of the American Statistical Association, American Statistical Association, vol. 105(490), pages 727-739.
    4. Howard D. Bondell & Brian J. Reich, 2008. "Simultaneous Regression Shrinkage, Variable Selection, and Supervised Clustering of Predictors with OSCAR," Biometrics, The International Biometric Society, vol. 64(1), pages 115-123, March.
    5. Hui Zou & Trevor Hastie, 2005. "Addendum: Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(5), pages 768-768, November.
    6. Hui Zou & Trevor Hastie, 2005. "Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(2), pages 301-320, April.
    7. Xiaotong Shen & Wei Pan & Yunzhang Zhu, 2012. "Likelihood-Based Selection and Sharp Parameter Estimation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(497), pages 223-232, March.
    8. Li, Fan & Zhang, Nancy R., 2010. "Bayesian Variable Selection in Structured High-Dimensional Covariate Spaces With Applications in Genomics," Journal of the American Statistical Association, American Statistical Association, vol. 105(491), pages 1202-1214.
    9. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    10. Ming Yuan & Yi Lin, 2006. "Model selection and estimation in regression with grouped variables," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(1), pages 49-67, February.
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    Cited by:

    1. Mengyun Wu & Fan Wang & Yeheng Ge & Shuangge Ma & Yang Li, 2023. "Bi‐level structured functional analysis for genome‐wide association studies," Biometrics, The International Biometric Society, vol. 79(4), pages 3359-3373, December.
    2. Guan Yu & Yufeng Liu, 2016. "Sparse Regression Incorporating Graphical Structure Among Predictors," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(514), pages 707-720, April.
    3. Liu, Jianyu & Yu, Guan & Liu, Yufeng, 2019. "Graph-based sparse linear discriminant analysis for high-dimensional classification," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 250-269.

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