IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-51666-2.html
   My bibliography  Save this article

Identifying the multiple drivers of cactus diversification

Author

Listed:
  • Jamie B. Thompson

    (Reading
    University of Bath)

  • Tania Hernández-Hernández

    (Desert Botanical Garden)

  • Georgia Keeling

    (University of Bath)

  • Marilyn Vásquez-Cruz

    (Tecnológico Nacional de México)

  • Nicholas K. Priest

    (University of Bath)

Abstract

Our understanding of the complexity of forces at play in the rise of major angiosperm lineages remains incomplete. The diversity and heterogeneous distribution of most angiosperm lineages is so extraordinary that it confounds our ability to identify simple drivers of diversification. Using machine learning in combination with phylogenetic modelling, we show that five separate abiotic and biotic variables significantly contribute to the diversification of Cactaceae. We reconstruct a comprehensive phylogeny, build a dataset of 39 abiotic and biotic variables, and predict the variables of central importance, while accounting for potential interactions between those variables. We use state-dependent diversification models to confirm that five abiotic and biotic variables shape diversification in the cactus family. Of highest importance are diurnal air temperature range, soil sand content and plant size, with lesser importance identified in isothermality and geographic range size. Interestingly, each of the estimated optimal conditions for abiotic variables were intermediate, indicating that cactus diversification is promoted by moderate, not extreme, climates. Our results reveal the potential primary drivers of cactus diversification, and the need to account for the complexity underlying the evolution of angiosperm lineages.

Suggested Citation

  • Jamie B. Thompson & Tania Hernández-Hernández & Georgia Keeling & Marilyn Vásquez-Cruz & Nicholas K. Priest, 2024. "Identifying the multiple drivers of cactus diversification," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-51666-2
    DOI: 10.1038/s41467-024-51666-2
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-51666-2
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-51666-2?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Daniel L. Rabosky & Jonathan Chang & Pascal O. Title & Peter F. Cowman & Lauren Sallan & Matt Friedman & Kristin Kaschner & Cristina Garilao & Thomas J. Near & Marta Coll & Michael E. Alfaro, 2018. "An inverse latitudinal gradient in speciation rate for marine fishes," Nature, Nature, vol. 559(7714), pages 392-395, July.
    2. Alexandre C. Siqueira & Renato A. Morais & David R. Bellwood & Peter F. Cowman, 2020. "Trophic innovations fuel reef fish diversification," Nature Communications, Nature, vol. 11(1), pages 1-11, December.
    3. Charles R. Harris & K. Jarrod Millman & Stéfan J. Walt & Ralf Gommers & Pauli Virtanen & David Cournapeau & Eric Wieser & Julian Taylor & Sebastian Berg & Nathaniel J. Smith & Robert Kern & Matti Picu, 2020. "Array programming with NumPy," Nature, Nature, vol. 585(7825), pages 357-362, September.
    4. Stilianos Louca & Matthew W. Pennell, 2020. "Extant timetrees are consistent with a myriad of diversification histories," Nature, Nature, vol. 580(7804), pages 502-505, April.
    5. W. Jetz & G. H. Thomas & J. B. Joy & K. Hartmann & A. O. Mooers, 2012. "The global diversity of birds in space and time," Nature, Nature, vol. 491(7424), pages 444-448, November.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Sarah T. Friedman & Martha M. Muñoz, 2023. "A latitudinal gradient of deep-sea invasions for marine fishes," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    2. Felipe O. Cerezer & Cristian S. Dambros & Marco T. P. Coelho & Fernanda A. S. Cassemiro & Elisa Barreto & James S. Albert & Rafael O. Wüest & Catherine H. Graham, 2023. "Accelerated body size evolution in upland environments is correlated with recent speciation in South American freshwater fishes," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    3. Dimitar Dimitrov & Xiaoting Xu & Xiangyan Su & Nawal Shrestha & Yunpeng Liu & Jonathan D. Kennedy & Lisha Lyu & David Nogués-Bravo & James Rosindell & Yong Yang & Jon Fjeldså & Jianquan Liu & Bernhard, 2023. "Diversification of flowering plants in space and time," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    4. Maxime Policarpo & Maude W. Baldwin & Didier Casane & Walter Salzburger, 2024. "Diversity and evolution of the vertebrate chemoreceptor gene repertoire," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    5. Gregory Thom & Marcelo Gehara & Brian Tilston Smith & Cristina Y. Miyaki & Fábio Raposo Amaral, 2021. "Microevolutionary dynamics show tropical valleys are deeper for montane birds of the Atlantic Forest," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
    6. Andrew F Magee & Sebastian Höhna & Tetyana I Vasylyeva & Adam D Leaché & Vladimir N Minin, 2020. "Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts," PLOS Computational Biology, Public Library of Science, vol. 16(10), pages 1-23, October.
    7. Jan Smyčka & Anna Toszogyova & David Storch, 2023. "The relationship between geographic range size and rates of species diversification," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    8. Joan Garcia-Porta & Daniel Sol & Matt Pennell & Ferran Sayol & Antigoni Kaliontzopoulou & Carlos A. Botero, 2022. "Niche expansion and adaptive divergence in the global radiation of crows and ravens," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    9. Ana C. Afonso Silva & Odile Maliet & Leandro Aristide & David Nogués-Bravo & Nathan Upham & Walter Jetz & Hélène Morlon, 2025. "Negative global-scale association between genetic diversity and speciation rates in mammals," Nature Communications, Nature, vol. 16(1), pages 1-12, December.
    10. Geeraert, Joke & Rocha, Luis E.C. & Vandeviver, Christophe, 2024. "The impact of violent behavior on co-offender selection: Evidence of behavioral homophily," Journal of Criminal Justice, Elsevier, vol. 94(C).
    11. Furqan Dar & Samuel R. Cohen & Diana M. Mitrea & Aaron H. Phillips & Gergely Nagy & Wellington C. Leite & Christopher B. Stanley & Jeong-Mo Choi & Richard W. Kriwacki & Rohit V. Pappu, 2024. "Biomolecular condensates form spatially inhomogeneous network fluids," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    12. López Pérez, Mario & Mansilla Corona, Ricardo, 2022. "Ordinal synchronization and typical states in high-frequency digital markets," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 598(C).
    13. Jessica M. Vanslambrouck & Sean B. Wilson & Ker Sin Tan & Ella Groenewegen & Rajeev Rudraraju & Jessica Neil & Kynan T. Lawlor & Sophia Mah & Michelle Scurr & Sara E. Howden & Kanta Subbarao & Melissa, 2022. "Enhanced metanephric specification to functional proximal tubule enables toxicity screening and infectious disease modelling in kidney organoids," Nature Communications, Nature, vol. 13(1), pages 1-23, December.
    14. Dennis Bontempi & Leonard Nuernberg & Suraj Pai & Deepa Krishnaswamy & Vamsi Thiriveedhi & Ahmed Hosny & Raymond H. Mak & Keyvan Farahani & Ron Kikinis & Andrey Fedorov & Hugo J. W. L. Aerts, 2024. "End-to-end reproducible AI pipelines in radiology using the cloud," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
    15. Pablo García-Risueño, 2025. "Historical Simulation Systematically Underestimates the Expected Shortfall," JRFM, MDPI, vol. 18(1), pages 1-12, January.
    16. Lauren L. Porter & Allen K. Kim & Swechha Rimal & Loren L. Looger & Ananya Majumdar & Brett D. Mensh & Mary R. Starich & Marie-Paule Strub, 2022. "Many dissimilar NusG protein domains switch between α-helix and β-sheet folds," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    17. Oren Amsalem & Hidehiko Inagaki & Jianing Yu & Karel Svoboda & Ran Darshan, 2024. "Sub-threshold neuronal activity and the dynamical regime of cerebral cortex," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    18. Matthew Rosenblatt & Link Tejavibulya & Rongtao Jiang & Stephanie Noble & Dustin Scheinost, 2024. "Data leakage inflates prediction performance in connectome-based machine learning models," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    19. Sayedali Shetab Boushehri & Katharina Essig & Nikolaos-Kosmas Chlis & Sylvia Herter & Marina Bacac & Fabian J. Theis & Elke Glasmacher & Carsten Marr & Fabian Schmich, 2023. "Explainable machine learning for profiling the immunological synapse and functional characterization of therapeutic antibodies," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    20. Venkat Ram Reddy Ganuthula & Krishna Kumar Balaraman & Nimish Vohra, 2025. "Hedonic Adaptation in the Age of AI: A Perspective on Diminishing Satisfaction Returns in Technology Adoption," Papers 2503.08074, arXiv.org.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-51666-2. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.