IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-34080-4.html
   My bibliography  Save this article

Tyrosine phosphorylation regulates RIPK1 activity to limit cell death and inflammation

Author

Listed:
  • Hailin Tu

    (Tsinghua University)

  • Weihang Xiong

    (Tsinghua University
    Tsinghua University–Peking University Center for Life Sciences)

  • Jie Zhang

    (Tsinghua University)

  • Xueqiang Zhao

    (Tsinghua University)

  • Xin Lin

    (Tsinghua University
    Tsinghua University–Peking University Center for Life Sciences)

Abstract

Receptor-interacting serine/threonine-protein kinase 1 (RIPK1) is a cytosolic protein kinase that regulates multiple inflammatory and cell death pathways. Serine/Threonine phosphorylation of RIPK1 is known to suppress RIPK1 kinase-mediated cell death in the contexts of inflammation, infection and embryogenesis, however, regulation by tyrosine phosphorylation has not been reported. Here, we show that non-receptor tyrosine kinases Janus kinase 1 (JAK1) and SRC are able to phosphorylate RIPK1 at Y384 (Y383 in murine RIPK1), leading to suppression of TNF-induced cell death. Mice bearing a homozygous Ripk1 mutation that prevents tyrosine phosphorylation of RIPK1 (Ripk1Y383F/Y383F), develop systemic inflammation and emergency haematopoiesis. Mechanistically, Ripk1Y383F/Y383F mutation promotes RIPK1 kinase activation and enhances TNF-induced apoptosis and necroptosis, which is partially due to impaired recruitment and activation of MAP kinase-activated protein kinase 2 (MK2). The systemic inflammation and emergency haematopoiesis in Ripk1Y383F/Y383F mice are largely alleviated by RIPK1 kinase inhibition, and prevented by genomic deletions targeted to the upstream pathway (either to Tumor necrosis factor receptor 1 or RIPK3 and Caspase8 simultaneously). In summary, our results demonstrate that tyrosine phosphorylation of RIPK1 is critical for regulating RIPK1 activity to limit cell death and inflammation.

Suggested Citation

  • Hailin Tu & Weihang Xiong & Jie Zhang & Xueqiang Zhao & Xin Lin, 2022. "Tyrosine phosphorylation regulates RIPK1 activity to limit cell death and inflammation," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-34080-4
    DOI: 10.1038/s41467-022-34080-4
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-34080-4
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-022-34080-4?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Keith A. Lawson & Cristovão M. Sousa & Xiaoyu Zhang & Eiru Kim & Rummy Akthar & Joseph J. Caumanns & Yuxi Yao & Nicholas Mikolajewicz & Catherine Ross & Kevin R. Brown & Abdelrahman Abou Zid & Zi Peng, 2020. "Functional genomic landscape of cancer-intrinsic evasion of killing by T cells," Nature, Nature, vol. 586(7827), pages 120-126, October.
    2. Jinbo Han & Erwei Li & Liqun Chen & Yuanyuan Zhang & Fangchao Wei & Jieyuan Liu & Haiteng Deng & Yiguo Wang, 2015. "The CREB coactivator CRTC2 controls hepatic lipid metabolism by regulating SREBP1," Nature, Nature, vol. 524(7564), pages 243-246, August.
    3. Yves Dondelinger & Tom Delanghe & Dario Priem & Meghan A. Wynosky-Dolfi & Daniel Sorobetea & Diego Rojas-Rivera & Piero Giansanti & Ria Roelandt & Julia Gropengiesser & Klaus Ruckdeschel & Savvas N. S, 2019. "Serine 25 phosphorylation inhibits RIPK1 kinase-dependent cell death in models of infection and inflammation," Nature Communications, Nature, vol. 10(1), pages 1-16, December.
    4. Najoua Lalaoui & Steven E. Boyden & Hirotsugu Oda & Geryl M. Wood & Deborah L. Stone & Diep Chau & Lin Liu & Monique Stoffels & Tobias Kratina & Kate E. Lawlor & Kristien J. M. Zaal & Patrycja M. Hoff, 2020. "Mutations that prevent caspase cleavage of RIPK1 cause autoinflammatory disease," Nature, Nature, vol. 577(7788), pages 103-108, January.
    5. Yong Tang & Hailin Tu & Jie Zhang & Xueqiang Zhao & Yini Wang & Jun Qin & Xin Lin, 2019. "K63-linked ubiquitination regulates RIPK1 kinase activity to prevent cell death during embryogenesis and inflammation," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
    6. Xixi Zhang & Haiwei Zhang & Chengxian Xu & Xiaoming Li & Ming Li & Xiaoxia Wu & Wenjuan Pu & Bin Zhou & Haikun Wang & Dali Li & Qiurong Ding & Hao Ying & Hui Wang & Haibing Zhang, 2019. "Ubiquitination of RIPK1 suppresses programmed cell death by regulating RIPK1 kinase activation during embryogenesis," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
    7. Jiefei Geng & Yasushi Ito & Linyu Shi & Palak Amin & Jiachen Chu & Amanda Tomie Ouchida & Adnan Kasim Mookhtiar & Heng Zhao & Daichao Xu & Bing Shan & Ayaz Najafov & Guangping Gao & Shizuo Akira & Jun, 2017. "Regulation of RIPK1 activation by TAK1-mediated phosphorylation dictates apoptosis and necroptosis," Nature Communications, Nature, vol. 8(1), pages 1-12, December.
    8. Kim Newton & Katherine E. Wickliffe & Debra L. Dugger & Allie Maltzman & Merone Roose-Girma & Monika Dohse & László Kőműves & Joshua D. Webster & Vishva M. Dixit, 2019. "Cleavage of RIPK1 by caspase-8 is crucial for limiting apoptosis and necroptosis," Nature, Nature, vol. 574(7778), pages 428-431, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Jingchun Du & Yougui Xiang & Hua Liu & Shuzhen Liu & Ashwani Kumar & Chao Xing & Zhigao Wang, 2021. "RIPK1 dephosphorylation and kinase activation by PPP1R3G/PP1γ promote apoptosis and necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
    2. Chao-Yu Yang & Chia-I Lien & Yi-Chun Tseng & Yi-Fan Tu & Arkadiusz W. Kulczyk & Yen-Chen Lu & Yin-Ting Wang & Tsung-Wei Su & Li-Chung Hsu & Yu-Chih Lo & Su-Chang Lin, 2024. "Deciphering DED assembly mechanisms in FADD-procaspase-8-cFLIP complexes regulating apoptosis," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    3. Shane T. Killarney & Rachel Washart & Ryan S. Soderquist & Jacob P. Hoj & Jamie Lebhar & Kevin H. Lin & Kris C. Wood, 2023. "Executioner caspases restrict mitochondrial RNA-driven Type I IFN induction during chemotherapy-induced apoptosis," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    4. Lei Xia & Anastasia Komissarova & Arielle Jacover & Yehuda Shovman & Sebastian Arcila-Barrera & Sharona Tornovsky-Babeay & Milsee Mol Jaya Prakashan & Abdelmajeed Nasereddin & Inbar Plaschkes & Yuval , 2023. "Systematic identification of gene combinations to target in innate immune cells to enhance T cell activation," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
    5. Lucia Taraborrelli & Yasin Şenbabaoğlu & Lifen Wang & Junghyun Lim & Kerrigan Blake & Noelyn Kljavin & Sarah Gierke & Alexis Scherl & James Ziai & Erin McNamara & Mark Owyong & Shilpa Rao & Aslihan Ka, 2023. "Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    6. Lu Jin & Shuang Han & Xue Lv & Xiaofei Li & Ziyin Zhang & Henry Kuang & Zhimin Chen & Cheng-an Lv & Wei Peng & Zhuoying Yang & Miqi Yang & Lin Mi & Tongyu Liu & Shengshan Ma & Xinyuan Qiu & Qintao Wan, 2023. "The muscle-enriched myokine Musclin impairs beige fat thermogenesis and systemic energy homeostasis via Tfr1/PKA signaling in male mice," Nature Communications, Nature, vol. 14(1), pages 1-23, December.
    7. Remzi Onur Eren & Göksu Gökberk Kaya & Robin Schwarzer & Manolis Pasparakis, 2024. "IKKε and TBK1 prevent RIPK1 dependent and independent inflammation," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    8. Julia Joung & Paul C. Kirchgatterer & Ankita Singh & Jang H. Cho & Suchita P. Nety & Rebecca C. Larson & Rhiannon K. Macrae & Rebecca Deasy & Yuen-Yi Tseng & Marcela V. Maus & Feng Zhang, 2022. "CRISPR activation screen identifies BCL-2 proteins and B3GNT2 as drivers of cancer resistance to T cell-mediated cytotoxicity," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    9. Tian-Yu Song & Min Long & Hai-Xin Zhao & Miao-Wen Zou & Hong-Jie Fan & Yang Liu & Chen-Lu Geng & Min-Fang Song & Yu-Feng Liu & Jun-Yi Chen & Yu-Lin Yang & Wen-Rong Zhou & Da-Wei Huang & Bo Peng & Zhen, 2021. "Tumor evolution selectively inactivates the core microRNA machinery for immune evasion," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
    10. Louise A. Baldwin & Nenad Bartonicek & Jessica Yang & Sunny Z. Wu & Niantao Deng & Daniel L. Roden & Chia-Ling Chan & Ghamdan Al-Eryani & Damien J. Zanker & Belinda S. Parker & Alexander Swarbrick & S, 2022. "DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and immunotherapy response," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
    11. Azucena Ramos & Catherine E. Koch & Yunpeng Liu-Lupo & Riley D. Hellinger & Taeyoon Kyung & Keene L. Abbott & Julia Fröse & Daniel Goulet & Khloe S. Gordon & Keith P. Eidell & Paul Leclerc & Charles A, 2023. "Leukemia-intrinsic determinants of CAR-T response revealed by iterative in vivo genome-wide CRISPR screening," Nature Communications, Nature, vol. 14(1), pages 1-21, December.
    12. Dongjin Pan & Yunzhu Yang & Aihua Nong & Zhenzhou Tang & Qing X. Li, 2022. "GRP78 Activity Moderation as a Therapeutic Treatment against Obesity," IJERPH, MDPI, vol. 19(23), pages 1-17, November.
    13. Nina Frey & Luigi Tortola & David Egli & Sharan Janjuha & Tanja Rothgangl & Kim Fabiano Marquart & Franziska Ampenberger & Manfred Kopf & Gerald Schwank, 2022. "Loss of Rnf31 and Vps4b sensitizes pancreatic cancer to T cell-mediated killing," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    14. Wen Wei & Qiaoli Chen & Minjun Liu & Yang Sheng & Qian OuYang & Weikuan Feng & Xinyu Yang & Longfei Ding & Shu Su & Jingzi Zhang & Lei Fang & Antonio Vidal-Puig & Hong-Yu Wang & Shuai Chen, 2022. "TRIM24 is an insulin-responsive regulator of P-bodies," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    15. Lingjie Yan & Tao Zhang & Kai Wang & Zezhao Chen & Yuanxin Yang & Bing Shan & Qi Sun & Mengmeng Zhang & Yichi Zhang & Yedan Zhong & Nan Liu & Jinyang Gu & Daichao Xu, 2022. "SENP1 prevents steatohepatitis by suppressing RIPK1-driven apoptosis and inflammation," Nature Communications, Nature, vol. 13(1), pages 1-19, December.
    16. Dzana Dervovic & Ahmad A. Malik & Edward L. Y. Chen & Masahiro Narimatsu & Nina Adler & Somaieh Afiuni-Zadeh & Dagmar Krenbek & Sebastien Martinez & Ricky Tsai & Jonathan Boucher & Jacob M. Berman & K, 2023. "In vivo CRISPR screens reveal Serpinb9 and Adam2 as regulators of immune therapy response in lung cancer," Nature Communications, Nature, vol. 14(1), pages 1-21, December.
    17. Tao Zhang & Na Zhang & Jing Xing & Shuhua Zhang & Yulu Chen & Daichao Xu & Jinyang Gu, 2023. "UDP-glucuronate metabolism controls RIPK1-driven liver damage in nonalcoholic steatohepatitis," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    18. Martin Lauss & Bengt Phung & Troels Holz Borch & Katja Harbst & Kamila Kaminska & Anna Ebbesson & Ingrid Hedenfalk & Joan Yuan & Kari Nielsen & Christian Ingvar & Ana Carneiro & Karolin Isaksson & Kri, 2024. "Molecular patterns of resistance to immune checkpoint blockade in melanoma," Nature Communications, Nature, vol. 15(1), pages 1-14, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-34080-4. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.