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Low-dose self-amplifying mRNA COVID-19 vaccine drives strong protective immunity in non-human primates against SARS-CoV-2 infection

Author

Listed:
  • Amy R. Rappaport

    (Gritstone bio, Inc.)

  • Sue-Jean Hong

    (Gritstone bio, Inc.)

  • Ciaran D. Scallan

    (Gritstone bio, Inc.)

  • Leonid Gitlin

    (Gritstone bio, Inc.)

  • Arvin Akoopie

    (Gritstone bio, Inc.)

  • Gregory R. Boucher

    (Gritstone bio, Inc.)

  • Milana Egorova

    (Gritstone bio, Inc.)

  • J. Aaron Espinosa

    (Gritstone bio, Inc.)

  • Mario Fidanza

    (Gritstone bio, Inc.)

  • Melissa A. Kachura

    (Gritstone bio, Inc.)

  • Annie Shen

    (Gritstone bio, Inc.)

  • Gloria Sivko

    (Battelle Biomedical Research Center)

  • Anne Abbema

    (Gritstone bio, Inc.)

  • Robert L. Veres

    (Gritstone bio, Inc.)

  • Karin Jooss

    (Gritstone bio, Inc.)

Abstract

The coronavirus disease 2019 (COVID-19) pandemic continues to spread globally, highlighting the urgent need for safe and effective vaccines that could be rapidly mobilized to immunize large populations. We report the preclinical development of a self-amplifying mRNA (SAM) vaccine encoding a prefusion stabilized severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike glycoprotein and demonstrate strong cellular and humoral immune responses at low doses in mice and rhesus macaques. The homologous prime-boost vaccination regimen of SAM at 3, 10 and 30 μg induced potent neutralizing antibody (nAb) titers in rhesus macaques following two SAM vaccinations at all dose levels, with the 10 μg dose generating geometric mean titers (GMT) 48-fold greater than the GMT of a panel of SARS-CoV-2 convalescent human sera. Spike-specific T cell responses were observed with all tested vaccine regimens. SAM vaccination provided protective efficacy against SARS-CoV-2 challenge as both a homologous prime-boost and as a single boost following ChAd prime, demonstrating reduction of viral replication in both the upper and lower airways. The SAM vaccine is currently being evaluated in clinical trials as both a homologous prime-boost regimen at low doses and as a boost following heterologous prime.

Suggested Citation

  • Amy R. Rappaport & Sue-Jean Hong & Ciaran D. Scallan & Leonid Gitlin & Arvin Akoopie & Gregory R. Boucher & Milana Egorova & J. Aaron Espinosa & Mario Fidanza & Melissa A. Kachura & Annie Shen & Glori, 2022. "Low-dose self-amplifying mRNA COVID-19 vaccine drives strong protective immunity in non-human primates against SARS-CoV-2 infection," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-31005-z
    DOI: 10.1038/s41467-022-31005-z
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    1. Noe B. Mercado & Roland Zahn & Frank Wegmann & Carolin Loos & Abishek Chandrashekar & Jingyou Yu & Jinyan Liu & Lauren Peter & Katherine McMahan & Lisa H. Tostanoski & Xuan He & David R. Martinez & Lu, 2020. "Single-shot Ad26 vaccine protects against SARS-CoV-2 in rhesus macaques," Nature, Nature, vol. 586(7830), pages 583-588, October.
    2. Alexandra J. Spencer & Paul F. McKay & Sandra Belij-Rammerstorfer & Marta Ulaszewska & Cameron D. Bissett & Kai Hu & Karnyart Samnuan & Anna K. Blakney & Daniel Wright & Hannah R. Sharpe & Ciaran Gilb, 2021. "Heterologous vaccination regimens with self-amplifying RNA and adenoviral COVID vaccines induce robust immune responses in mice," Nature Communications, Nature, vol. 12(1), pages 1-8, December.
    3. Neeltje van Doremalen & Teresa Lambe & Alexandra Spencer & Sandra Belij-Rammerstorfer & Jyothi N. Purushotham & Julia R. Port & Victoria A. Avanzato & Trenton Bushmaker & Amy Flaxman & Marta Ulaszewsk, 2020. "ChAdOx1 nCoV-19 vaccine prevents SARS-CoV-2 pneumonia in rhesus macaques," Nature, Nature, vol. 586(7830), pages 578-582, October.
    4. Ugur Sahin & Alexander Muik & Isabel Vogler & Evelyna Derhovanessian & Lena M. Kranz & Mathias Vormehr & Jasmin Quandt & Nicole Bidmon & Alexander Ulges & Alina Baum & Kristen E. Pascal & Daniel Mauru, 2021. "BNT162b2 vaccine induces neutralizing antibodies and poly-specific T cells in humans," Nature, Nature, vol. 595(7868), pages 572-577, July.
    5. Annette B. Vogel & Isis Kanevsky & Ye Che & Kena A. Swanson & Alexander Muik & Mathias Vormehr & Lena M. Kranz & Kerstin C. Walzer & Stephanie Hein & Alptekin Güler & Jakob Loschko & Mohan S. Maddur &, 2021. "BNT162b vaccines protect rhesus macaques from SARS-CoV-2," Nature, Nature, vol. 592(7853), pages 283-289, April.
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    2. Christine D. Palmer & Ciaran D. Scallan & Lauren D. Kraemer Tardif & Melissa A. Kachura & Amy R. Rappaport & Daniel O. Koralek & Alison Uriel & Leonid Gitlin & Joshua Klein & Matthew J. Davis & Harshn, 2023. "GRT-R910: a self-amplifying mRNA SARS-CoV-2 vaccine boosts immunity for ≥6 months in previously-vaccinated older adults," Nature Communications, Nature, vol. 14(1), pages 1-17, December.

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