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On the reliability of N†mixture models for count data

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  • Richard J. Barker
  • Matthew R. Schofield
  • William A. Link
  • John R. Sauer

Abstract

N†mixture models describe count data replicated in time and across sites in terms of abundance N and detectability p. They are popular because they allow inference about N while controlling for factors that influence p without the need for marking animals. Using a capture–recapture perspective, we show that the loss of information that results from not marking animals is critical, making reliable statistical modeling of N and p problematic using just count data. One cannot reliably fit a model in which the detection probabilities are distinct among repeat visits as this model is overspecified. This makes uncontrolled variation in p problematic. By counter example, we show that even if p is constant after adjusting for covariate effects (the “constant p†assumption) scientifically plausible alternative models in which N (or its expectation) is non†identifiable or does not even exist as a parameter, lead to data that are practically indistinguishable from data generated under an N†mixture model. This is particularly the case for sparse data as is commonly seen in applications. We conclude that under the constant p assumption reliable inference is only possible for relative abundance in the absence of questionable and/or untestable assumptions or with better quality data than seen in typical applications. Relative abundance models for counts can be readily fitted using Poisson regression in standard software such as R and are sufficiently flexible to allow controlling for p through the use covariates while simultaneously modeling variation in relative abundance. If users require estimates of absolute abundance, they should collect auxiliary data that help with estimation of p.

Suggested Citation

  • Richard J. Barker & Matthew R. Schofield & William A. Link & John R. Sauer, 2018. "On the reliability of N†mixture models for count data," Biometrics, The International Biometric Society, vol. 74(1), pages 369-377, March.
  • Handle: RePEc:bla:biomet:v:74:y:2018:i:1:p:369-377
    DOI: 10.1111/biom.12734
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    References listed on IDEAS

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    1. J. Andrew Royle, 2004. "N-Mixture Models for Estimating Population Size from Spatially Replicated Counts," Biometrics, The International Biometric Society, vol. 60(1), pages 108-115, March.
    2. Emily B. Dennis & Byron J.T. Morgan & Martin S. Ridout, 2015. "Computational aspects of N-mixture models," Biometrics, The International Biometric Society, vol. 71(1), pages 237-246, March.
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    Cited by:

    1. Adam Martin-Schwarze & Jarad Niemi & Philip Dixon, 2021. "Joint Modeling of Distances and Times in Point-Count Surveys," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(2), pages 289-305, June.
    2. Perry J. Williams & Cody Schroeder & Pat Jackson, 2020. "Estimating Reproduction and Survival of Unmarked Juveniles Using Aerial Images and Marked Adults," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(2), pages 133-147, June.
    3. Xinyi Lu & Mevin B. Hooten & Andee Kaplan & Jamie N. Womble & Michael R. Bower, 2022. "Improving Wildlife Population Inference Using Aerial Imagery and Entity Resolution," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 27(2), pages 364-381, June.
    4. Steen, Valerie A. & Duarte, Adam & Peterson, James T., 2023. "An evaluation of multistate occupancy models for estimating relative abundance and population trends," Ecological Modelling, Elsevier, vol. 478(C).

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