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A Statistical Framework for the Analysis of ChIP-Seq Data

Author

Listed:
  • Kuan, Pei Fen
  • Chung, Dongjun
  • Pan, Guangjin
  • Thomson, James A.
  • Stewart, Ron
  • KeleÅŸ, Sündüz

Abstract

No abstract is available for this item.

Suggested Citation

  • Kuan, Pei Fen & Chung, Dongjun & Pan, Guangjin & Thomson, James A. & Stewart, Ron & KeleÅŸ, Sündüz, 2011. "A Statistical Framework for the Analysis of ChIP-Seq Data," Journal of the American Statistical Association, American Statistical Association, vol. 106(495), pages 891-903.
    • Handle: RePEc:bes:jnlasa:v:106:i:495:y:2011:p:891-903
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    File URL: http://pubs.amstat.org/doi/abs/10.1198/jasa.2011.ap09706
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    Cited by:

    1. Guannan Sun & Rajini Srinivasan & Camila Lopez-Anido & Holly A Hung & John Svaren & Sündüz Keleş, 2014. "In Silico Pooling of ChIP-seq Control Experiments," PLOS ONE, Public Library of Science, vol. 9(11), pages 1-9, November.
    2. Vishaka Datta & Sridhar Hannenhalli & Rahul Siddharthan, 2019. "ChIPulate: A comprehensive ChIP-seq simulation pipeline," PLOS Computational Biology, Public Library of Science, vol. 15(3), pages 1-32, March.
    3. Dai, Hongsheng & Bao, Yanchun & Bao, Mingtang, 2013. "Maximum likelihood estimate for the dispersion parameter of the negative binomial distribution," Statistics & Probability Letters, Elsevier, vol. 83(1), pages 21-27.
    4. Dongjun Chung & Dan Park & Kevin Myers & Jeffrey Grass & Patricia Kiley & Robert Landick & Sündüz Keleş, 2013. "dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data," PLOS Computational Biology, Public Library of Science, vol. 9(10), pages 1-13, October.
    5. Vivoda, Vlado, 2012. "Japan’s energy security predicament post-Fukushima," Energy Policy, Elsevier, vol. 46(C), pages 135-143.

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