IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0156035.html
   My bibliography  Save this article

FISICO: Fast Image SegmentatIon COrrection

Author

Listed:
  • Waldo Valenzuela
  • Stephen J Ferguson
  • Dominika Ignasiak
  • Gaëlle Diserens
  • Levin Häni
  • Roland Wiest
  • Peter Vermathen
  • Chris Boesch
  • Mauricio Reyes

Abstract

Background and Purpose: In clinical diagnosis, medical image segmentation plays a key role in the analysis of pathological regions. Despite advances in automatic and semi-automatic segmentation techniques, time-effective correction tools are commonly needed to improve segmentation results. Therefore, these tools must provide faster corrections with a lower number of interactions, and a user-independent solution to reduce the time frame between image acquisition and diagnosis. Methods: We present a new interactive method for correcting image segmentations. Our method provides 3D shape corrections through 2D interactions. This approach enables an intuitive and natural corrections of 3D segmentation results. The developed method has been implemented into a software tool and has been evaluated for the task of lumbar muscle and knee joint segmentations from MR images. Results: Experimental results show that full segmentation corrections could be performed within an average correction time of 5.5±3.3 minutes and an average of 56.5±33.1 user interactions, while maintaining the quality of the final segmentation result within an average Dice coefficient of 0.92±0.02 for both anatomies. In addition, for users with different levels of expertise, our method yields a correction time and number of interaction decrease from 38±19.2 minutes to 6.4±4.3 minutes, and 339±157.1 to 67.7±39.6 interactions, respectively.

Suggested Citation

  • Waldo Valenzuela & Stephen J Ferguson & Dominika Ignasiak & Gaëlle Diserens & Levin Häni & Roland Wiest & Peter Vermathen & Chris Boesch & Mauricio Reyes, 2016. "FISICO: Fast Image SegmentatIon COrrection," PLOS ONE, Public Library of Science, vol. 11(5), pages 1-17, May.
  • Handle: RePEc:plo:pone00:0156035
    DOI: 10.1371/journal.pone.0156035
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0156035
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0156035&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0156035?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0156035. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.