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Mutant p53 shapes the enhancer landscape of cancer cells in response to chronic immune signaling

Author

Listed:
  • Homa Rahnamoun

    (University of California, San Diego)

  • Hanbin Lu

    (University of California, San Diego)

  • Sascha H. Duttke

    (University of California, San Diego)

  • Christopher Benner

    (University of California, San Diego)

  • Christopher K. Glass

    (University of California, San Diego
    University of California, San Diego)

  • Shannon M. Lauberth

    (University of California, San Diego)

Abstract

Inflammation influences cancer development, progression, and the efficacy of cancer treatments, yet the mechanisms by which immune signaling drives alterations in the cancer cell transcriptome remain unclear. Using ChIP-seq, RNA-seq, and GRO-seq, here we demonstrate a global overlap in the binding of tumor-promoting p53 mutants and the master proinflammatory regulator NFκB that drives alterations in enhancer and gene activation in response to chronic TNF-α signaling. We show that p53 mutants interact directly with NFκB and that both factors impact the other’s binding at diverse sets of active enhancers. In turn, the simultaneous and cooperative binding of these factors is required to regulate RNAPII recruitment, the synthesis of enhancer RNAs, and the activation of tumor-promoting genes. Collectively, these findings establish a mechanism by which chronic TNF-α signaling orchestrates a functional interplay between mutant p53 and NFκB that underlies altered patterns of cancer-promoting gene expression.

Suggested Citation

  • Homa Rahnamoun & Hanbin Lu & Sascha H. Duttke & Christopher Benner & Christopher K. Glass & Shannon M. Lauberth, 2017. "Mutant p53 shapes the enhancer landscape of cancer cells in response to chronic immune signaling," Nature Communications, Nature, vol. 8(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:8:y:2017:i:1:d:10.1038_s41467-017-01117-y
    DOI: 10.1038/s41467-017-01117-y
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    Cited by:

    1. Ori Hassin & Nishanth Belugali Nataraj & Michal Shreberk-Shaked & Yael Aylon & Rona Yaeger & Giulia Fontemaggi & Saptaparna Mukherjee & Martino Maddalena & Adi Avioz & Ortal Iancu & Giuseppe Mallel & , 2022. "Different hotspot p53 mutants exert distinct phenotypes and predict outcome of colorectal cancer patients," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    2. Mei Zhao & Tianxiao Wang & Frederico O. Gleber-Netto & Zhen Chen & Daniel J. McGrail & Javier A. Gomez & Wutong Ju & Mayur A. Gadhikar & Wencai Ma & Li Shen & Qi Wang & Ximing Tang & Sen Pathak & Mari, 2024. "Mutant p53 gains oncogenic functions through a chromosomal instability-induced cytosolic DNA response," Nature Communications, Nature, vol. 15(1), pages 1-18, December.

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