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Blazed oblique plane microscopy reveals scale-invariant inference of brain-wide population activity

Author

Listed:
  • Maximilian Hoffmann

    (Charité – Universitätsmedizin Berlin
    Rockefeller University)

  • Jörg Henninger

    (Charité – Universitätsmedizin Berlin)

  • Johannes Veith

    (Charité – Universitätsmedizin Berlin
    Humboldt University Berlin)

  • Lars Richter

    (Ludwig Maximilians University)

  • Benjamin Judkewitz

    (Charité – Universitätsmedizin Berlin)

Abstract

Due to the size and opacity of vertebrate brains, it has until now been impossible to simultaneously record neuronal activity at cellular resolution across the entire adult brain. As a result, scientists are forced to choose between cellular-resolution microscopy over limited fields-of-view or whole-brain imaging at coarse-grained resolution. Bridging the gap between these spatial scales of understanding remains a major challenge in neuroscience. Here, we introduce blazed oblique plane microscopy to perform brain-wide recording of neuronal activity at cellular resolution in an adult vertebrate. Contrary to common belief, we find that inferences of neuronal population activity are near-independent of spatial scale: a set of randomly sampled neurons has a comparable predictive power as the same number of coarse-grained macrovoxels. Our work thus links cellular resolution with brain-wide scope, challenges the prevailing view that macroscale methods are generally inferior to microscale techniques and underscores the value of multiscale approaches to studying brain-wide activity.

Suggested Citation

  • Maximilian Hoffmann & Jörg Henninger & Johannes Veith & Lars Richter & Benjamin Judkewitz, 2023. "Blazed oblique plane microscopy reveals scale-invariant inference of brain-wide population activity," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-43741-x
    DOI: 10.1038/s41467-023-43741-x
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    References listed on IDEAS

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