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PKD1 and PKD2 mRNA cis-inhibition drives polycystic kidney disease progression

Author

Listed:
  • Ronak Lakhia

    (UT Southwestern Medical Center)

  • Harini Ramalingam

    (UT Southwestern Medical Center)

  • Chun-Mien Chang

    (UT Southwestern Medical Center)

  • Patricia Cobo-Stark

    (UT Southwestern Medical Center)

  • Laurence Biggers

    (UT Southwestern Medical Center)

  • Andrea Flaten

    (UT Southwestern Medical Center)

  • Jesus Alvarez

    (UT Southwestern Medical Center)

  • Tania Valencia

    (Regulus Therapeutics Inc.)

  • Darren P. Wallace

    (University of Kansas Medical Center)

  • Edmund C. Lee

    (Regulus Therapeutics Inc.)

  • Vishal Patel

    (UT Southwestern Medical Center)

Abstract

Autosomal dominant polycystic kidney disease (ADPKD), among the most common human genetic conditions and a frequent etiology of kidney failure, is primarily caused by heterozygous PKD1 mutations. Kidney cyst formation occurs when PKD1 dosage falls below a critical threshold. However, no framework exists to harness the remaining allele or reverse PKD1 decline. Here, we show that mRNAs produced by the noninactivated PKD1 allele are repressed via their 3′-UTR miR-17 binding element. Eliminating this motif (Pkd1∆17) improves mRNA stability, raises Polycystin-1 levels, and alleviates cyst growth in cellular, ex vivo, and mouse PKD models. Remarkably, Pkd2 is also inhibited via its 3′-UTR miR-17 motif, and Pkd2∆17-induced Polycystin-2 derepression retards cyst growth in Pkd1-mutant models. Moreover, acutely blocking Pkd1/2 cis-inhibition, including after cyst onset, attenuates murine PKD. Finally, modeling PKD1∆17 or PKD2∆17 alleles in patient-derived primary ADPKD cultures leads to smaller cysts, reduced proliferation, lower pCreb1 expression, and improved mitochondrial membrane potential. Thus, evading 3′-UTR cis-interference and enhancing PKD1/2 mRNA translation is a potentially mutation-agnostic ADPKD-arresting approach.

Suggested Citation

  • Ronak Lakhia & Harini Ramalingam & Chun-Mien Chang & Patricia Cobo-Stark & Laurence Biggers & Andrea Flaten & Jesus Alvarez & Tania Valencia & Darren P. Wallace & Edmund C. Lee & Vishal Patel, 2022. "PKD1 and PKD2 mRNA cis-inhibition drives polycystic kidney disease progression," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-32543-2
    DOI: 10.1038/s41467-022-32543-2
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    References listed on IDEAS

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    1. Edmund C. Lee & Tania Valencia & Charles Allerson & Annelie Schairer & Andrea Flaten & Matanel Yheskel & Kara Kersjes & Jian Li & Sole Gatto & Mandeep Takhar & Steven Lockton & Adam Pavlicek & Michael, 2019. "Discovery and preclinical evaluation of anti-miR-17 oligonucleotide RGLS4326 for the treatment of polycystic kidney disease," Nature Communications, Nature, vol. 10(1), pages 1-14, December.
    2. Tomoyuki Tsukiyama & Kenichi Kobayashi & Masataka Nakaya & Chizuru Iwatani & Yasunari Seita & Hideaki Tsuchiya & Jun Matsushita & Kahoru Kitajima & Ikuo Kawamoto & Takahiro Nakagawa & Koji Fukuda & Te, 2019. "Monkeys mutant for PKD1 recapitulate human autosomal dominant polycystic kidney disease," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
    3. Daehyun Baek & Judit Villén & Chanseok Shin & Fernando D. Camargo & Steven P. Gygi & David P. Bartel, 2008. "The impact of microRNAs on protein output," Nature, Nature, vol. 455(7209), pages 64-71, September.
    4. Sachin Hajarnis & Ronak Lakhia & Matanel Yheskel & Darren Williams & Mehran Sorourian & Xueqing Liu & Karam Aboudehen & Shanrong Zhang & Kara Kersjes & Ryan Galasso & Jian Li & Vivek Kaimal & Steven L, 2017. "microRNA-17 family promotes polycystic kidney disease progression through modulation of mitochondrial metabolism," Nature Communications, Nature, vol. 8(1), pages 1-15, April.
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