IDEAS home Printed from https://ideas.repec.org/a/jss/jstsof/v074i11.html
   My bibliography  Save this article

synthpop: Bespoke Creation of Synthetic Data in R

Author

Listed:
  • Nowok, Beata
  • Raab, Gillian M.
  • Dibben, Chris

Abstract

In many contexts, confidentiality constraints severely restrict access to unique and valuable microdata. Synthetic data which mimic the original observed data and preserve the relationships between variables but do not contain any disclosive records are one possible solution to this problem. The synthpop package for R, introduced in this paper, provides routines to generate synthetic versions of original data sets. We describe the methodology and its consequences for the data characteristics. We illustrate the package features using a survey data example.

Suggested Citation

  • Nowok, Beata & Raab, Gillian M. & Dibben, Chris, 2016. "synthpop: Bespoke Creation of Synthetic Data in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 74(i11).
  • Handle: RePEc:jss:jstsof:v:074:i11
    DOI: http://hdl.handle.net/10.18637/jss.v074.i11
    as

    Download full text from publisher

    File URL: https://www.jstatsoft.org/index.php/jss/article/view/v074i11/v74i11.pdf
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v074i11/synthpop_1.3-0.tar.gz
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v074i11/v74i11.R
    Download Restriction: no

    File URL: https://libkey.io/http://hdl.handle.net/10.18637/jss.v074.i11?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. van Buuren, Stef & Groothuis-Oudshoorn, Karin, 2011. "mice: Multivariate Imputation by Chained Equations in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 45(i03).
    2. Kingsley Purdam & Mark Elliot, 2007. "A Case Study of the Impact of Statistical Disclosure Control on Data Quality in the Individual UK Samples of Anonymised Records," Environment and Planning A, , vol. 39(5), pages 1101-1118, May.
    3. Drechsler, Jörg & Reiter, Jerome P., 2011. "An empirical evaluation of easily implemented, nonparametric methods for generating synthetic datasets," Computational Statistics & Data Analysis, Elsevier, vol. 55(12), pages 3232-3243, December.
    4. Satkartar K. Kinney & Jerome P. Reiter & Arnold P. Reznek & Javier Miranda & Ron S. Jarmin & John M. Abowd, 2011. "Towards Unrestricted Public Use Business Microdata: The Synthetic Longitudinal Business Database," International Statistical Review, International Statistical Institute, vol. 79(3), pages 362-384, December.
    5. Reiter, Jerome P. & Raghunathan, Trivellore E., 2007. "The Multiple Adaptations of Multiple Imputation," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 1462-1471, December.
    6. John M. Abowd & Julia I. Lane, 2004. "New Approaches to Confidentiality Protection Synthetic Data, Remote Access and Research Data Centers," Longitudinal Employer-Household Dynamics Technical Papers 2004-03, Center for Economic Studies, U.S. Census Bureau.
    7. Andreas Alfons & Stefan Kraft & Matthias Templ & Peter Filzmoser, 2011. "Simulation of close-to-reality population data for household surveys with application to EU-SILC," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 20(3), pages 383-407, August.
    8. John M. Abowd & Simon D. Woodcock, 2004. "Multiply-Imputing Confidential Characteristics and File Links in Longitudinal Linked Data," Longitudinal Employer-Household Dynamics Technical Papers 2004-04, Center for Economic Studies, U.S. Census Bureau.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Joshua Snoke & Gillian M. Raab & Beata Nowok & Chris Dibben & Aleksandra Slavkovic, 2018. "General and specific utility measures for synthetic data," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 181(3), pages 663-688, June.
    2. Daiho Uhm & Sunghae Jun, 2022. "Zero-Inflated Patent Data Analysis Using Generating Synthetic Samples," Future Internet, MDPI, vol. 14(7), pages 1-11, July.
    3. Stefan Wimmer & Robert Finger, 2023. "A note on synthetic data for replication purposes in agricultural economics," Journal of Agricultural Economics, Wiley Blackwell, vol. 74(1), pages 316-323, February.
    4. Dominik Bietsch & Robert Stahlbock & Stefan Voß, 2023. "Synthetic Data as a Proxy for Real-World Electronic Health Records in the Patient Length of Stay Prediction," Sustainability, MDPI, vol. 15(18), pages 1-30, September.
    5. Asunur Cezar & Srinivasan Raghunathan & Sumit Sarkar, 2020. "Adversarial Classification: Impact of Agents’ Faking Cost on Firms and Agents," Production and Operations Management, Production and Operations Management Society, vol. 29(12), pages 2789-2807, December.
    6. Lau Lilleholt & Ingo Zettler & Cornelia Betsch & Robert Böhm, 2023. "Development and validation of the pandemic fatigue scale," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
    7. Wesley J. Marrero & Mariel S. Lavieri & Jeremy B. Sussman, 2021. "Optimal cholesterol treatment plans and genetic testing strategies for cardiovascular diseases," Health Care Management Science, Springer, vol. 24(1), pages 1-25, March.
    8. Gunjan Chandra & Pekka Siirtola & Satu Tamminen & Mikael J. Knip & Riitta Veijola & Juha Röning, 2022. "Impacts of Data Synthesis: A Metric for Quantifiable Data Standards and Performances," Data, MDPI, vol. 7(12), pages 1-26, December.
    9. Jahangir Alam M. & Dostie Benoit & Drechsler Jörg & Vilhuber Lars, 2020. "Applying data synthesis for longitudinal business data across three countries," Statistics in Transition New Series, Polish Statistical Association, vol. 21(4), pages 212-236, August.
    10. James Jackson & Robin Mitra & Brian Francis & Iain Dove, 2022. "Using saturated count models for user‐friendly synthesis of large confidential administrative databases," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 185(4), pages 1613-1643, October.
    11. Speidel, Matthias & Drechsler, Jörg & Jolani, Shahab, 2018. "R package hmi: a convenient tool for hierarchical multiple imputation and beyond," IAB-Discussion Paper 201816, Institut für Arbeitsmarkt- und Berufsforschung (IAB), Nürnberg [Institute for Employment Research, Nuremberg, Germany].
    12. Erik D. Mueller & J. S. Onésimo Sandoval & Srikanth P. Mudigonda & Michael Elliott, 2019. "Extending cluster-based ensemble learning through synthetic population generation for modeling disparities in health insurance coverage across Missouri," Journal of Computational Social Science, Springer, vol. 2(2), pages 271-291, July.
    13. Felix Ritchie & Jim Smith, 2019. "Confidentiality and linked data," Papers 1907.06465, arXiv.org.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Satkartar K. Kinney & Jerome P. Reiter & Javier Miranda, 2014. "Improving The Synthetic Longitudinal Business Database," Working Papers 14-12, Center for Economic Studies, U.S. Census Bureau.
    2. Hang J. Kim & Jerome P. Reiter & Alan F. Karr, 2018. "Simultaneous edit-imputation and disclosure limitation for business establishment data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 45(1), pages 63-82, January.
    3. Drechsler, Jörg & Reiter, Jerome P., 2011. "An empirical evaluation of easily implemented, nonparametric methods for generating synthetic datasets," Computational Statistics & Data Analysis, Elsevier, vol. 55(12), pages 3232-3243, December.
    4. repec:cup:judgdm:v:15:y:2020:i:5:p:798-806 is not listed on IDEAS
    5. Amanda M. Y. Chu & Benson S. Y. Lam & Agnes Tiwari & Mike K. P. So, 2019. "An Empirical Study of Applying Statistical Disclosure Control Methods to Public Health Research," IJERPH, MDPI, vol. 16(22), pages 1-17, November.
    6. Rashid, S. & Mitra, R. & Steele, R.J., 2015. "Using mixtures of t densities to make inferences in the presence of missing data with a small number of multiply imputed data sets," Computational Statistics & Data Analysis, Elsevier, vol. 92(C), pages 84-96.
    7. Joseph W. Sakshaug & Trivellore E. Raghunathan, 2014. "Generating synthetic microdata to estimate small area statistics in the American Community Survey," Statistics in Transition new series, Główny Urząd Statystyczny (Polska), vol. 15(3), pages 341-368, June.
    8. Humera Razzak & Christian Heumann, 2019. "Hybrid Multiple Imputation In A Large Scale Complex Survey," Statistics in Transition New Series, Polish Statistical Association, vol. 20(4), pages 33-58, December.
    9. Razzak Humera & Heumann Christian, 2019. "Hybrid Multiple Imputation In A Large Scale Complex Survey," Statistics in Transition New Series, Polish Statistical Association, vol. 20(4), pages 33-58, December.
    10. Joshua Snoke & Gillian M. Raab & Beata Nowok & Chris Dibben & Aleksandra Slavkovic, 2018. "General and specific utility measures for synthetic data," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 181(3), pages 663-688, June.
    11. Gary Benedetto & Jordan C. Stanley & Evan Totty, 2018. "The Creation and Use of the SIPP Synthetic Beta v7.0," CES Technical Notes Series 18-03, Center for Economic Studies, U.S. Census Bureau.
    12. Jörg Drechsler, 2015. "Multiple Imputation of Multilevel Missing Data—Rigor Versus Simplicity," Journal of Educational and Behavioral Statistics, , vol. 40(1), pages 69-95, February.
    13. Simon Grund & Oliver Lüdtke & Alexander Robitzsch, 2016. "Multiple Imputation of Multilevel Missing Data," SAGE Open, , vol. 6(4), pages 21582440166, October.
    14. Daniel Manrique‐Vallier & Jingchen Hu, 2018. "Bayesian non‐parametric generation of fully synthetic multivariate categorical data in the presence of structural zeros," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 181(3), pages 635-647, June.
    15. Speidel, Matthias & Drechsler, Jörg & Jolani, Shahab, 2018. "R package hmi: a convenient tool for hierarchical multiple imputation and beyond," IAB-Discussion Paper 201816, Institut für Arbeitsmarkt- und Berufsforschung (IAB), Nürnberg [Institute for Employment Research, Nuremberg, Germany].
    16. Stefan Wimmer & Robert Finger, 2023. "A note on synthetic data for replication purposes in agricultural economics," Journal of Agricultural Economics, Wiley Blackwell, vol. 74(1), pages 316-323, February.
    17. Lenka Vargová & Ľubica Zibrínová & Gabriel Baník, 2020. "The way of making choices: Maximizing and satisficing and its relationship to well-being, personality, and self-rumination," Judgment and Decision Making, Society for Judgment and Decision Making, vol. 15(5), pages 798-806, September.
    18. Noémi Kreif & Richard Grieve & Iván Díaz & David Harrison, 2015. "Evaluation of the Effect of a Continuous Treatment: A Machine Learning Approach with an Application to Treatment for Traumatic Brain Injury," Health Economics, John Wiley & Sons, Ltd., vol. 24(9), pages 1213-1228, September.
    19. Abhilash Bandam & Eedris Busari & Chloi Syranidou & Jochen Linssen & Detlef Stolten, 2022. "Classification of Building Types in Germany: A Data-Driven Modeling Approach," Data, MDPI, vol. 7(4), pages 1-23, April.
    20. Boonstra Philip S. & Little Roderick J.A. & West Brady T. & Andridge Rebecca R. & Alvarado-Leiton Fernanda, 2021. "A Simulation Study of Diagnostics for Selection Bias," Journal of Official Statistics, Sciendo, vol. 37(3), pages 751-769, September.
    21. Christopher J Greenwood & George J Youssef & Primrose Letcher & Jacqui A Macdonald & Lauryn J Hagg & Ann Sanson & Jenn Mcintosh & Delyse M Hutchinson & John W Toumbourou & Matthew Fuller-Tyszkiewicz &, 2020. "A comparison of penalised regression methods for informing the selection of predictive markers," PLOS ONE, Public Library of Science, vol. 15(11), pages 1-14, November.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:jss:jstsof:v:074:i11. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Christopher F. Baum (email available below). General contact details of provider: http://www.jstatsoft.org/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.