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Momocs: Outline Analysis Using R

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  • Bonhomme, Vincent
  • Picq, Sandrine
  • Gaucherel, Cédric
  • Claude, Julien

Abstract

We introduce here Momocs, a package intended to ease and popularize modern morphometrics with R, and particularly outline analysis, which aims to extract quantitative variables from shapes. It mostly hinges on the functions published in the book entitled Modern Morphometrics Using R by Claude (2008). From outline extraction from raw data to multivariate analysis, Momocs provides an integrated and convenient toolkit to students and researchers who are, or may become, interested in describing the shape and its variation. The methods implemented so far in Momocs are introduced through a simplistic case study that aims to test if two sets of bottles have different shapes.

Suggested Citation

  • Bonhomme, Vincent & Picq, Sandrine & Gaucherel, Cédric & Claude, Julien, 2014. "Momocs: Outline Analysis Using R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 56(i13).
    • Handle: RePEc:jss:jstsof:v:056:i13
    DOI: http://hdl.handle.net/10.18637/jss.v056.i13
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    References listed on IDEAS

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    1. Bowman, Adrian, 2009. "Morphometrics with R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 31(b01).
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    Cited by:

    1. Sabrina B Sholts & Joseph A M Gingerich & Stefan Schlager & Dennis J Stanford & Sebastian K T S Wärmländer, 2017. "Tracing social interactions in Pleistocene North America via 3D model analysis of stone tool asymmetry," PLOS ONE, Public Library of Science, vol. 12(7), pages 1-18, July.
    2. Robyn A Grant & Luca Taraborrelli & Tom Allen, 2022. "Morphometrics for sports mechanics: Showcasing tennis racket shape diversity," PLOS ONE, Public Library of Science, vol. 17(1), pages 1-15, January.
    3. Baku Takahara & Kazuo H Takahashi, 2015. "Genome-Wide Association Study on Male Genital Shape and Size in Drosophila melanogaster," PLOS ONE, Public Library of Science, vol. 10(7), pages 1-13, July.
    4. Radu Iovita & Inbal Tuvi-Arad & Marie-Hélène Moncel & Jackie Despriée & Pierre Voinchet & Jean-Jacques Bahain, 2017. "High handaxe symmetry at the beginning of the European Acheulian: The data from la Noira (France) in context," PLOS ONE, Public Library of Science, vol. 12(5), pages 1-25, May.
    5. Christopher J Mooney & Michael J Kingsford, 2016. "Statolith Morphometrics Can Discriminate among Taxa of Cubozoan Jellyfishes," PLOS ONE, Public Library of Science, vol. 11(5), pages 1-16, May.
    6. Muriel Gros-Balthazard & Claire Newton & Sarah Ivorra & Marie-Hélène Pierre & Jean-Christophe Pintaud & Jean-Frédéric Terral, 2016. "The Domestication Syndrome in Phoenix dactylifera Seeds: Toward the Identification of Wild Date Palm Populations," PLOS ONE, Public Library of Science, vol. 11(3), pages 1-21, March.
    7. Fabien Lafuma & Ian J. Corfe & Julien Clavel & Nicolas Di-Poï, 2021. "Multiple evolutionary origins and losses of tooth complexity in squamates," Nature Communications, Nature, vol. 12(1), pages 1-13, December.
    8. Felix Riede & Christian Hoggard & Stephen Shennan, 2019. "Reconciling material cultures in archaeology with genetic data requires robust cultural evolutionary taxonomies," Palgrave Communications, Palgrave Macmillan, vol. 5(1), pages 1-9, December.

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