IDEAS home Printed from https://ideas.repec.org/a/gam/jagris/v14y2024i3p389-d1347912.html
   My bibliography  Save this article

Comparative Analysis of Feature Importance Algorithms for Grassland Aboveground Biomass and Nutrient Prediction Using Hyperspectral Data

Author

Listed:
  • Yue Zhao

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Dawei Xu

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Shuzhen Li

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Kai Tang

    (State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing Science and Engineering, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China)

  • Hongliang Yu

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Ruirui Yan

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Zhenwang Li

    (Jiangsu Key Laboratory of Crop Genetics and Physiology/Jiangsu Key Laboratory of Crop Cultivation and Physiology, Agricultural College, Yangzhou University, Yangzhou 225009, China)

  • Xu Wang

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

  • Xiaoping Xin

    (State Key Laboratory of Efficient Utilization of Arid and Semi-Arid Arable Land in Northern China, Key Laboratory of Grassland Resource Monitoring Evaluation and Innovative Utilization, Ministry of Agriculture and Rural Affairs, Hulunber Grassland Ecosystem National Observation and Research Station, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, China)

Abstract

Estimating forage yield and nutrient composition using hyperspectral remote sensing is a major challenge. However, there is still a lack of comprehensive research on the optimal wavelength for the analysis of various nutrients in pasture. In this research, conducted in Hailar District, Hulunber City, Inner Mongolia Autonomous Region, China, 126 sets of hyperspectral data were collected, covering a spectral range of 350 to 1800 nanometers. The primary objective was to identify key spectral bands for estimating forage dry matter yield (DMY), nitrogen content (NC), neutral detergent fiber (NDF), and acid detergent fiber (ADF) using principal component analysis (PCA), random forests (RF), and SHapley Additive exPlanations (SHAP) analysis methods, and then the RF and Extra-Trees algorithm (ERT) model was used to predict aboveground biomass (AGB) and nutrient parameters using the optimized spectral bands and vegetation indices. Our approach effectively minimizes redundancy in hyperspectral data by selectively employing crucial spectral bands, thus improving the accuracy of forage nutrient estimation. PCA identified the most variable bands at 400 nm, 520–550 nm, 670–720 nm, and 930–950 nm, reflecting their general spectral significance rather than a link to specific forage nutrients. Further analysis using RF feature importance pinpointed influential bands, predominantly within 930–940 nm and 700–730 nm. SHAP analysis confirmed critical bands for DMY (965 nm, 712 nm, and 1652 nm), NC (1390 nm and 713 nm), ADF (1390 nm and 715–725 nm), and NDF (400 nm, 983 nm, 1350 nm, and 1800 nm). The fitting accuracy for ADF estimated using RF was lower ( R 2 = 0.58), while the fitting accuracy for other indicators was higher ( R 2 ≥ 0.59). The performance and prediction accuracy of ERT ( R 2 = 0.63) were noticeably superior to those of RF. In conclusion, our method effectively identifies influential bands, optimizing forage yield and quality estimation.

Suggested Citation

  • Yue Zhao & Dawei Xu & Shuzhen Li & Kai Tang & Hongliang Yu & Ruirui Yan & Zhenwang Li & Xu Wang & Xiaoping Xin, 2024. "Comparative Analysis of Feature Importance Algorithms for Grassland Aboveground Biomass and Nutrient Prediction Using Hyperspectral Data," Agriculture, MDPI, vol. 14(3), pages 1-18, February.
  • Handle: RePEc:gam:jagris:v:14:y:2024:i:3:p:389-:d:1347912
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2077-0472/14/3/389/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/2077-0472/14/3/389/
    Download Restriction: no
    ---><---

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jagris:v:14:y:2024:i:3:p:389-:d:1347912. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.