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Bayesian modelling for spatially misaligned health areal data: A multiple membership approach

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  • Marco Gramatica
  • Peter Congdon
  • Silvia Liverani

Abstract

Diabetes prevalence is on the rise in the United Kingdom, and for public health strategy, estimation of relative disease risk and subsequent mapping is important. We consider an application to London data on diabetes prevalence and mortality. In order to improve the estimation of relative risks, we analyse jointly prevalence and mortality data to ensure borrowing strength over the two outcomes. The available data involve two spatial frameworks, areas (Middle Layer Super Output Areas, MSOAs) and general practices (GPs) recruiting patients from several areas. This raises a spatial misalignment issue that we deal with by employing the multiple membership principle. Specifically, we translate areal spatial effects to explain GP practice prevalence according to proportions of GP populations resident in different areas. A sparse implementation in RStan of both the multivariate conditional autoregressive (MCAR) and generalised MCAR (GMCAR) with multiple membership allows the comparison of these bivariate priors as well as exploring the different implications for the mapping patterns for both outcomes. The necessary causal precedence of diabetes prevalence over mortality allows a specific conditionality assumption in the GMCAR, not always present in the context of disease mapping. Additionally, an area‐locality comparison is considered to locate high versus low relative risk clusters.

Suggested Citation

  • Marco Gramatica & Peter Congdon & Silvia Liverani, 2021. "Bayesian modelling for spatially misaligned health areal data: A multiple membership approach," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 70(3), pages 645-666, June.
  • Handle: RePEc:bla:jorssc:v:70:y:2021:i:3:p:645-666
    DOI: 10.1111/rssc.12480
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    1. Sturtz, Sibylle & Ligges, Uwe & Gelman, Andrew, 2005. "R2WinBUGS: A Package for Running WinBUGS from R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 12(i03).
    2. Mardia, K. V., 1988. "Multi-dimensional multivariate Gaussian Markov random fields with application to image processing," Journal of Multivariate Analysis, Elsevier, vol. 24(2), pages 265-284, February.
    3. Carpenter, Bob & Gelman, Andrew & Hoffman, Matthew D. & Lee, Daniel & Goodrich, Ben & Betancourt, Michael & Brubaker, Marcus & Guo, Jiqiang & Li, Peter & Riddell, Allen, 2017. "Stan: A Probabilistic Programming Language," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 76(i01).
    4. Xiaoping Jin & Bradley P. Carlin & Sudipto Banerjee, 2005. "Generalized Hierarchical Multivariate CAR Models for Areal Data," Biometrics, The International Biometric Society, vol. 61(4), pages 950-961, December.
    5. Qian Ren & Sudipto Banerjee, 2013. "Hierarchical Factor Models for Large Spatially Misaligned Data: A Low-Rank Predictive Process Approach," Biometrics, The International Biometric Society, vol. 69(1), pages 19-30, March.
    6. Jonathan R. Bradley & Christopher K. Wikle & Scott H. Holan, 2016. "Bayesian Spatial Change of Support for Count-Valued Survey Data With Application to the American Community Survey," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(514), pages 472-487, April.
    7. David J. Spiegelhalter & Nicola G. Best & Bradley P. Carlin & Angelika Van Der Linde, 2002. "Bayesian measures of model complexity and fit," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(4), pages 583-639, October.
    8. Xiaoping Jin & Sudipto Banerjee & Bradley P. Carlin, 2007. "Order‐free co‐regionalized areal data models with application to multiple‐disease mapping," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 69(5), pages 817-838, November.
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