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A nonparametric Bayesian model for estimating spectral densities of resting‐state EEG twin data

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  • Brian Hart
  • Michele Guindani
  • Stephen Malone
  • Mark Fiecas

Abstract

Electroencephalography (EEG) is a noninvasive neuroimaging modality that captures electrical brain activity many times per second. We seek to estimate power spectra from EEG data that ware gathered for 557 adolescent twin pairs through the Minnesota Twin Family Study (MTFS). Typically, spectral analysis methods treat time series from each subject separately, and independent spectral densities are fit to each time series. Since the EEG data were collected on twins, it is reasonable to assume that the time series have similar underlying characteristics, so borrowing information across subjects can significantly improve estimation. We propose a Nested Bernstein Dirichlet prior model to estimate the power spectrum of the EEG signal for each subject by smoothing periodograms within and across subjects while requiring minimal user input to tuning parameters. Furthermore, we leverage the MTFS twin study design to estimate the heritability of EEG power spectra with the hopes of establishing new endophenotypes. Through simulation studies designed to mimic the MTFS, we show our method out‐performs a set of other popular methods.

Suggested Citation

  • Brian Hart & Michele Guindani & Stephen Malone & Mark Fiecas, 2022. "A nonparametric Bayesian model for estimating spectral densities of resting‐state EEG twin data," Biometrics, The International Biometric Society, vol. 78(1), pages 313-323, March.
  • Handle: RePEc:bla:biomet:v:78:y:2022:i:1:p:313-323
    DOI: 10.1111/biom.13393
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    References listed on IDEAS

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    1. Rosen, Ori & Stoffer, David S. & Wood, Sally, 2009. "Local Spectral Analysis via a Bayesian Mixture of Smoothing Splines," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 249-262.
    2. Mark Fiecas & Hernando Ombao, 2016. "Modeling the Evolution of Dynamic Brain Processes During an Associative Learning Experiment," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1440-1453, October.
    3. Rodríguez, Abel & Dunson, David B & Gelfand, Alan E, 2008. "The Nested Dirichlet Process," Journal of the American Statistical Association, American Statistical Association, vol. 103(483), pages 1131-1154.
    4. Yoshihide Kakizawa, 2006. "Bernstein polynomial estimation of a spectral density," Journal of Time Series Analysis, Wiley Blackwell, vol. 27(2), pages 253-287, March.
    5. Robert T. Krafty & Ori Rosen & David S. Stoffer & Daniel J. Buysse & Martica H. Hall, 2017. "Conditional Spectral Analysis of Replicated Multiple Time Series With Application to Nocturnal Physiology," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(520), pages 1405-1416, October.
    6. Nidhan Choudhuri & Subhashis Ghosal & Anindya Roy, 2004. "Bayesian Estimation of the Spectral Density of a Time Series," Journal of the American Statistical Association, American Statistical Association, vol. 99, pages 1050-1059, December.
    7. Sonia Petrone, 1999. "Random Bernstein Polynomials," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 26(3), pages 373-393, September.
    8. Andrés F. Barrientos & Alejandro Jara & Fernando A. Quintana, 2017. "Fully Nonparametric Regression for Bounded Data Using Dependent Bernstein Polynomials," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(518), pages 806-825, April.
    9. Robert T. Krafty & Martica Hall & Wensheng Guo, 2011. "Functional mixed effects spectral analysis," Biometrika, Biometrika Trust, vol. 98(3), pages 583-598.
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