IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v66y2010i3p684-693.html
   My bibliography  Save this article

Detecting Genomic Aberrations Using Products in a Multiscale Analysis

Author

Listed:
  • Xuesong Yu
  • Timothy W. Randolph
  • Hua Tang
  • Li Hsu

Abstract

No abstract is available for this item.

Suggested Citation

  • Xuesong Yu & Timothy W. Randolph & Hua Tang & Li Hsu, 2010. "Detecting Genomic Aberrations Using Products in a Multiscale Analysis," Biometrics, The International Biometric Society, vol. 66(3), pages 684-693, September.
    • Handle: RePEc:bla:biomet:v:66:y:2010:i:3:p:684-693
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1111/j.1541-0420.2009.01337.x
    Download Restriction: Access to full text is restricted to subscribers.
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Guha, Subharup & Li, Yi & Neuberg, Donna, 2008. "Bayesian Hidden Markov Modeling of Array CGH Data," Journal of the American Statistical Association, American Statistical Association, vol. 103, pages 485-497, June.
    2. Youngchao Ge & Sandrine Dudoit & Terence Speed, 2003. "Resampling-based multiple testing for microarray data analysis," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 12(1), pages 1-77, June.
    3. Fridlyand, Jane & Snijders, Antoine M. & Pinkel, Dan & Albertson, Donna G. & Jain, A.N.Ajay N., 2004. "Hidden Markov models approach to the analysis of array CGH data," Journal of Multivariate Analysis, Elsevier, vol. 90(1), pages 132-153, July.
    4. Nancy R. Zhang & David O. Siegmund, 2007. "A Modified Bayes Information Criterion with Applications to the Analysis of Comparative Genomic Hybridization Data," Biometrics, The International Biometric Society, vol. 63(1), pages 22-32, March.
    5. F. Picard & S. Robin & E. Lebarbier & J.-J. Daudin, 2007. "A Segmentation/Clustering Model for the Analysis of Array CGH Data," Biometrics, The International Biometric Society, vol. 63(3), pages 758-766, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Yu Chuan Tai & Mark N. Kvale & John S. Witte, 2010. "Segmentation and Estimation for SNP Microarrays: A Bayesian Multiple Change-Point Approach," Biometrics, The International Biometric Society, vol. 66(3), pages 675-683, September.
    2. Salvatore Fasola & Vito M. R. Muggeo & Helmut Küchenhoff, 2018. "A heuristic, iterative algorithm for change-point detection in abrupt change models," Computational Statistics, Springer, vol. 33(2), pages 997-1015, June.
    3. Huixia Judy Wang & Jianhua Hu, 2011. "Identification of Differential Aberrations in Multiple-Sample Array CGH Studies," Biometrics, The International Biometric Society, vol. 67(2), pages 353-362, June.
    4. Leighton Pritchard & Hui Liu & Clare Booth & Emma Douglas & Patrice François & Jacques Schrenzel & Peter E Hedley & Paul R J Birch & Ian K Toth, 2009. "Microarray Comparative Genomic Hybridisation Analysis Incorporating Genomic Organisation, and Application to Enterobacterial Plant Pathogens," PLOS Computational Biology, Public Library of Science, vol. 5(8), pages 1-17, August.
    5. Ebrahimi, Nader, 2008. "Simultaneous control of false positives and false negatives in multiple hypotheses testing," Journal of Multivariate Analysis, Elsevier, vol. 99(3), pages 437-450, March.
    6. Faicel Chamroukhi, 2016. "Piecewise Regression Mixture for Simultaneous Functional Data Clustering and Optimal Segmentation," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 374-411, October.
    7. Bertschek, Irene & Ohnemus, Jörg & Erdsiek, Daniel & Rammer, Christian & Andres, Raphaela & Kimpeler, Simone, 2019. "Monitoringbericht Kultur- und Kreativwirtschaft 2018," ZEW Expertises, ZEW - Leibniz Centre for European Economic Research, number 203157.
    8. Love Michael I. & Myšičková Alena & Sun Ruping & Kalscheuer Vera & Vingron Martin & Haas Stefan A., 2011. "Modeling Read Counts for CNV Detection in Exome Sequencing Data," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 10(1), pages 1-30, November.
    9. Yann Guédon, 2013. "Exploring the latent segmentation space for the assessment of multiple change-point models," Computational Statistics, Springer, vol. 28(6), pages 2641-2678, December.
    10. Debi P Bal & Badri N Rath, 2019. "Nonlinear causality between crude oil price and exchange rate: A comparative study of China and India - A Reassessment," Economics Bulletin, AccessEcon, vol. 39(1), pages 592-604.
    11. Davis, Richard A. & Hancock, Stacey A. & Yao, Yi-Ching, 2016. "On consistency of minimum description length model selection for piecewise autoregressions," Journal of Econometrics, Elsevier, vol. 194(2), pages 360-368.
    12. Vincent Guigues, 2012. "Nonparametric multivariate breakpoint detection for the means, variances, and covariances of a discrete time stochastic process," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 24(4), pages 857-882, December.
    13. Kurozumi, Eiji & Tuvaandorj, Purevdorj, 2011. "Model selection criteria in multivariate models with multiple structural changes," Journal of Econometrics, Elsevier, vol. 164(2), pages 218-238, October.
    14. Fryzlewicz, Piotr, 2020. "Detecting possibly frequent change-points: Wild Binary Segmentation 2 and steepest-drop model selection," LSE Research Online Documents on Economics 103430, London School of Economics and Political Science, LSE Library.
    15. Rameen Beroukhim & Ming Lin & Yuhyun Park & Ke Hao & Xiaojun Zhao & Levi A Garraway & Edward A Fox & Ephraim P Hochberg & Ingo K Mellinghoff & Matthias D Hofer & Aurelien Descazeaud & Mark A Rubin & M, 2006. "Inferring Loss-of-Heterozygosity from Unpaired Tumors Using High-Density Oligonucleotide SNP Arrays," PLOS Computational Biology, Public Library of Science, vol. 2(5), pages 1-10, May.
    16. Lee Jaeeun & Chen Jie, 2019. "A penalized regression approach for DNA copy number study using the sequencing data," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 18(4), pages 1-14, August.
    17. A. Gandolfi & M. Benelli & A. Magi & S. Chiti, 2013. "Moment estimation in discrete shifting level model applied to fast array-CGH segmentation," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 67(3), pages 227-262, August.
    18. Neil Kellard & Denise Osborn & Jerry Coakley & Alastair R. Hall & Denise R. Osborn & Nikolaos Sakkas, 2015. "Structural Break Inference Using Information Criteria in Models Estimated by Two-Stage Least Squares," Journal of Time Series Analysis, Wiley Blackwell, vol. 36(5), pages 741-762, September.
    19. Yoo-Ah Kim & Stefan Wuchty & Teresa M Przytycka, 2011. "Identifying Causal Genes and Dysregulated Pathways in Complex Diseases," PLOS Computational Biology, Public Library of Science, vol. 7(3), pages 1-13, March.
    20. Arnaud Dufays & Elysee Aristide Houndetoungan & Alain Coën, 2022. "Selective Linear Segmentation for Detecting Relevant Parameter Changes [Risks and Portfolio Decisions Involving Hedge Funds]," Journal of Financial Econometrics, Oxford University Press, vol. 20(4), pages 762-805.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:66:y:2010:i:3:p:684-693. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.