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Likelihood-Based Inference on Haplotype Effects in Genetic Association Studies

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  • Lin, D.Y.
  • Zeng, D.

Abstract

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Suggested Citation

  • Lin, D.Y. & Zeng, D., 2006. "Likelihood-Based Inference on Haplotype Effects in Genetic Association Studies," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 89-104, March.
  • Handle: RePEc:bes:jnlasa:v:101:y:2006:p:89-104
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    Citations

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    Cited by:

    1. French Benjamin & Lumley Thomas & Cappola Thomas P. & Mitra Nandita, 2012. "Non-Iterative, Regression-Based Estimation of Haplotype Associations with Censored Survival Outcomes," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 11(3), pages 1-24, February.
    2. X. Li & B. N. Thomas & S. M. Rich & D. Ecker & J. K. Tumwine & A. S. Foulkes, 2009. "Estimating and testing haplotype–trait associations in non‐diploid populations," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 58(5), pages 663-678, December.
    3. Thomas H. Scheike & Torben Martinussen & Jeremy D. Silver, 2010. "Estimating Haplotype Effects for Survival Data," Biometrics, The International Biometric Society, vol. 66(3), pages 705-715, September.
    4. Iryna Lobach & Raymond J. Carroll & Christine Spinka & Mitchell H. Gail & Nilanjan Chatterjee, 2008. "Haplotype‐Based Regression Analysis and Inference of Case–Control Studies with Unphased Genotypes and Measurement Errors in Environmental Exposures," Biometrics, The International Biometric Society, vol. 64(3), pages 673-684, September.
    5. Tianying Wang & Alex Asher, 2021. "Improved Semiparametric Analysis of Polygenic Gene–Environment Interactions in Case–Control Studies," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 13(3), pages 386-401, December.
    6. Hua Yun Chen & Daniel E. Rader & Mingyao Li, 2015. "Likelihood Inferences on Semiparametric Odds Ratio Model," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(511), pages 1125-1135, September.
    7. Jinbo Chen & Dongyu Lin & Hagit Hochner, 2012. "Semiparametric Maximum Likelihood Methods for Analyzing Genetic and Environmental Effects with Case-Control Mother–Child Pair Data," Biometrics, The International Biometric Society, vol. 68(3), pages 869-877, September.
    8. Wu Song & Yang Jie & Wu Rongling, 2010. "Mapping Quantitative Trait Loci in a Non-Equilibrium Population," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 9(1), pages 1-21, August.
    9. Yulia V. Marchenko & Raymond K. Carroll & Danyu Y. Lin & Christopher I. Amos & Roberto G. Gutierrez, 2008. "Semiparametric analysis of case–control genetic data in the presence of environmental factors," Stata Journal, StataCorp LP, vol. 8(3), pages 305-333, September.
    10. Jinbo Chen & Carmen Rodriguez, 2007. "Conditional Likelihood Methods for Haplotype-Based Association Analysis Using Matched Case–Control Data," Biometrics, The International Biometric Society, vol. 63(4), pages 1099-1107, December.
    11. Sinha Samiran & Gruber Stephen B & Mukherjee Bhramar & Rennert Gad, 2008. "Inference of the Haplotype Effect in a Matched Case-Control Study Using Unphased Genotype Data," The International Journal of Biostatistics, De Gruyter, vol. 4(1), pages 1-26, May.
    12. Bhramar Mukherjee & Nilanjan Chatterjee, 2008. "Exploiting Gene‐Environment Independence for Analysis of Case–Control Studies: An Empirical Bayes‐Type Shrinkage Estimator to Trade‐Off between Bias and Efficiency," Biometrics, The International Biometric Society, vol. 64(3), pages 685-694, September.

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