IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v112y2017icp170-185.html
   My bibliography  Save this article

Bayesian variable selection for a semi-competing risks model with three hazard functions

Author

Listed:
  • Chapple, Andrew G.
  • Vannucci, Marina
  • Thall, Peter F.
  • Lin, Steven

Abstract

A variable selection procedure is developed for a semi-competing risks regression model with three hazard functions that uses spike-and-slab priors and stochastic search variable selection algorithms for posterior inference. A rule is devised for choosing the threshold on the marginal posterior probability of variable inclusion based on the Deviance Information Criterion (DIC) that is examined in a simulation study. The method is applied to data from esophageal cancer patients from the MD Anderson Cancer Center, Houston, TX, where the most important covariates are selected in each of the hazards of effusion, death before effusion, and death after effusion. The DIC procedure that is proposed leads to similar selected models regardless of the choices of some of the hyperparameters. The application results show that patients with intensity-modulated radiation therapy have significantly reduced risks of pericardial effusion, pleural effusion, and death before either effusion type.

Suggested Citation

  • Chapple, Andrew G. & Vannucci, Marina & Thall, Peter F. & Lin, Steven, 2017. "Bayesian variable selection for a semi-competing risks model with three hazard functions," Computational Statistics & Data Analysis, Elsevier, vol. 112(C), pages 170-185.
    • Handle: RePEc:eee:csdana:v:112:y:2017:i:c:p:170-185
    DOI: 10.1016/j.csda.2017.03.002
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167947317300464
    Download Restriction: Full text for ScienceDirect subscribers only.
    File URL: https://libkey.io/10.1016/j.csda.2017.03.002?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. David J. Spiegelhalter & Nicola G. Best & Bradley P. Carlin & Angelika Van Der Linde, 2002. "Bayesian measures of model complexity and fit," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(4), pages 583-639, October.
    2. Kyu Ha Lee & Sebastien Haneuse & Deborah Schrag & Francesca Dominici, 2015. "Bayesian semiparametric analysis of semicompeting risks data: investigating hospital readmission after a pancreatic cancer diagnosis," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 64(2), pages 253-273, February.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Xifen Huang & Jinfeng Xu & Hao Guo & Jianhua Shi & Wenjie Zhao, 2022. "An MM Algorithm for the Frailty-Based Illness Death Model with Semi-Competing Risks Data," Mathematics, MDPI, vol. 10(19), pages 1-13, October.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Kyu Ha Lee & Virginie Rondeau & Sebastien Haneuse, 2017. "Accelerated failure time models for semi‐competing risks data in the presence of complex censoring," Biometrics, The International Biometric Society, vol. 73(4), pages 1401-1412, December.
    2. Mário de Castro & Ming‐Hui Chen & Yuanye Zhang & Anthony V. D'Amico, 2020. "A Bayesian multi‐risks survival (MRS) model in the presence of double censorings," Biometrics, The International Biometric Society, vol. 76(4), pages 1297-1309, December.
    3. Buddhavarapu, Prasad & Bansal, Prateek & Prozzi, Jorge A., 2021. "A new spatial count data model with time-varying parameters," Transportation Research Part B: Methodological, Elsevier, vol. 150(C), pages 566-586.
    4. Mumtaz, Haroon & Theodoridis, Konstantinos, 2017. "Common and country specific economic uncertainty," Journal of International Economics, Elsevier, vol. 105(C), pages 205-216.
    5. Christina Leuker & Thorsten Pachur & Ralph Hertwig & Timothy J. Pleskac, 2019. "Do people exploit risk–reward structures to simplify information processing in risky choice?," Journal of the Economic Science Association, Springer;Economic Science Association, vol. 5(1), pages 76-94, August.
    6. Rubio, F.J. & Steel, M.F.J., 2011. "Inference for grouped data with a truncated skew-Laplace distribution," Computational Statistics & Data Analysis, Elsevier, vol. 55(12), pages 3218-3231, December.
    7. Alessandri, Piergiorgio & Mumtaz, Haroon, 2019. "Financial regimes and uncertainty shocks," Journal of Monetary Economics, Elsevier, vol. 101(C), pages 31-46.
    8. Svetlana V. Tishkovskaya & Paul G. Blackwell, 2021. "Bayesian estimation of heterogeneous environments from animal movement data," Environmetrics, John Wiley & Sons, Ltd., vol. 32(6), September.
    9. Leonardo Oliveira Martins & Hirohisa Kishino, 2010. "Distribution of distances between topologies and its effect on detection of phylogenetic recombination," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 62(1), pages 145-159, February.
    10. Tamal Ghosh & Malay Ghosh & Jerry J. Maples & Xueying Tang, 2022. "Multivariate Global-Local Priors for Small Area Estimation," Stats, MDPI, vol. 5(3), pages 1-16, July.
    11. Eibich, Peter & Ziebarth, Nicolas, 2014. "Examining the Structure of Spatial Health Effects in Germany Using Hierarchical Bayes Models," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 49, pages 305-320.
    12. Wu, Ji & Guo, Mengmeng & Chen, Minghua & Jeon, Bang Nam, 2019. "Market power and risk-taking of banks: Some semiparametric evidence from emerging economies," Emerging Markets Review, Elsevier, vol. 41(C).
    13. repec:jss:jstsof:21:i08 is not listed on IDEAS
    14. Deng, Yaguo, 2016. "Efficiency evaluation of Spanish hotel chains," DES - Working Papers. Statistics and Econometrics. WS 23897, Universidad Carlos III de Madrid. Departamento de Estadística.
    15. Cathy W. S. Chen & Sangyeol Lee, 2017. "Bayesian causality test for integer-valued time series models with applications to climate and crime data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 66(4), pages 797-814, August.
    16. Makoto Chikaraishi & Akimasa Fujiwara & Junyi Zhang & Kay Axhausen, 2011. "Identifying variations and co-variations in discrete choice models," Transportation, Springer, vol. 38(6), pages 993-1016, November.
    17. Galatia Cleanthous & Emilio Porcu & Philip White, 2021. "Regularity and approximation of Gaussian random fields evolving temporally over compact two-point homogeneous spaces," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 30(4), pages 836-860, December.
    18. Baños-Pino, José F. & Boto-García, David & Zapico, Emma, 2021. "Persistence and dynamics in the efficiency of toll motorways: The Spanish case," Efficiency Series Papers 2021/03, University of Oviedo, Department of Economics, Oviedo Efficiency Group (OEG).
    19. Xing Ju Lee & Christopher C. Drovandi & Anthony N. Pettitt, 2015. "Model choice problems using approximate Bayesian computation with applications to pathogen transmission data sets," Biometrics, The International Biometric Society, vol. 71(1), pages 198-207, March.
    20. Chaix, Basile & Jouven, Xavier & Thomas, Frédérique & Leal, Cinira & Billaudeau, Nathalie & Bean, Kathy & Kestens, Yan & Jëgo, Bertrand & Pannier, Bruno & Danchin, Nicolas, 2011. "Why socially deprived populations have a faster resting heart rate: Impact of behaviour, life course anthropometry, and biology – the RECORD Cohort Study," Social Science & Medicine, Elsevier, vol. 73(10), pages 1543-1550.
    21. Emilio Augusto Coelho-Barros & Jorge Alberto Achcar & Josmar Mazucheli, 2010. "Longitudinal Poisson modeling: an application for CD4 counting in HIV-infected patients," Journal of Applied Statistics, Taylor & Francis Journals, vol. 37(5), pages 865-880.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:112:y:2017:i:c:p:170-185. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.