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Accelerated growth increases the somatic epimutation rate in trees

Author

Listed:
  • Ming Zhou

    (Technical University of Munich)

  • Gerhard Schmied

    (Technical University of Munich)

  • Binh Thanh Vo

    (Technical University of Munich)

  • Monika Bradatsch

    (Technical University of Munich)

  • Giulia Resente

    (University of Torino
    University of Greifswald)

  • Rashmi Hazarika

    (Technical University of Munich)

  • Ioanna Kakoulidou

    (Technical University of Munich)

  • Maria-Cecília Costa

    (Technical University of Munich)

  • Michele Serra

    (Technical University of Munich)

  • Richard L. Peters

    (Technical University of Munich)

  • Enno Uhl

    (Agriculture and Forestry)

  • Robert J. Schmitz

    (University of Georgia)

  • Torben Hilmers

    (Technical University of Munich)

  • Astor Toraño Caicoya

    (Technical University of Munich)

  • Alan Crivellaro

    (University of Torino)

  • Hans Pretzsch

    (Technical University of Munich)

  • Frank Johannes

    (Technical University of Munich)

Abstract

Trees are integral to ecosystems and hold considerable economic importance. Their exceptional longevity and modular structure also make them valuable models for studying the long-term accumulation of somatic mutations and epimutations in plants. Empirical evidence indicates that the annual rate of these stochastic events correlates negatively with generation time, suggesting that species with long lifespans have evolved mechanisms to mitigate the build-up of deleterious somatic variants. It has been hypothesized that this reduction is achieved by slowing growth and minimizing the number of cell divisions per unit time, thereby reducing errors associated with DNA replication. However, a direct test of this “mitotic-rate hypothesis” remains technically challenging. Here we take advantage of a 150 year-old experiment in European beech to show that a thinning-induced growth acceleration increases the annual rate of somatic epimutations in main stems and lateral branches of trees. We demonstrate that this effect is accompanied by a proportional increase in the rate of cell divisions per unit time. These findings support the notion that life-history constraints on growth rates in trees are not merely a trade-off between resource allocation and structural stability but also a strategy to preserve genetic and epigenetic fidelity over extended lifespans.

Suggested Citation

  • Ming Zhou & Gerhard Schmied & Binh Thanh Vo & Monika Bradatsch & Giulia Resente & Rashmi Hazarika & Ioanna Kakoulidou & Maria-Cecília Costa & Michele Serra & Richard L. Peters & Enno Uhl & Robert J. S, 2025. "Accelerated growth increases the somatic epimutation rate in trees," Nature Communications, Nature, vol. 16(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-65404-9
    DOI: 10.1038/s41467-025-65404-9
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    References listed on IDEAS

    as
    1. Alex Cagan & Adrian Baez-Ortega & Natalia Brzozowska & Federico Abascal & Tim H. H. Coorens & Mathijs A. Sanders & Andrew R. J. Lawson & Luke M. R. Harvey & Shriram Bhosle & David Jones & Raul E. Alca, 2022. "Somatic mutation rates scale with lifespan across mammals," Nature, Nature, vol. 604(7906), pages 517-524, April.
    2. Claude Becker & Jörg Hagmann & Jonas Müller & Daniel Koenig & Oliver Stegle & Karsten Borgwardt & Detlef Weigel, 2011. "Spontaneous epigenetic variation in the Arabidopsis thaliana methylome," Nature, Nature, vol. 480(7376), pages 245-249, December.
    3. Geoffrey B. West & James H. Brown & Brian J. Enquist, 2001. "A general model for ontogenetic growth," Nature, Nature, vol. 413(6856), pages 628-631, October.
    4. Robert Lanfear & Simon Y. W. Ho & T. Jonathan Davies & Angela T. Moles & Lonnie Aarssen & Nathan G. Swenson & Laura Warman & Amy E. Zanne & Andrew P. Allen, 2013. "Taller plants have lower rates of molecular evolution," Nature Communications, Nature, vol. 4(1), pages 1-7, October.
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