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Bayesian solution to the monotone likelihood in the standard mixture cure model

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  • Frederico M. Almeida
  • Vinícius D. Mayrink
  • Enrico A. Colosimo

Abstract

An advantage of the standard mixture cure model over an usual survival model is how it accounts for the population heterogeneity. It allows a joint estimation for the distribution related to the susceptible and non‐susceptible subjects. The estimation algorithm may provide ±∞$$ \pm \infty $$ coefficients when the likelihood cannot be maximized. This phenomenon is known as Monotone Likelihood (ML), common in survival and logistic regressions. The ML tends to appear in situations with small sample size, many censored times, many binary or unbalanced covariates. Particularly, it occurs when all uncensored cases correspond to one level of a binary covariate. The existing frequentist solution is an adaptation of the Firth correction, originally proposed to reduce bias of maximum likelihood estimates. It prevents ±∞$$ \pm \infty $$ estimates by penalizing the likelihood, with the penalty interpreted as the Bayesian Jeffreys prior. In this paper, the penalized likelihood of the standard mixture cure model is considered with different penalties (Bayesian priors). A Monte Carlo simulation study indicates good inference results, especially for balanced data sets. Finally, a real application involving a melanoma data illustrates the approach.

Suggested Citation

  • Frederico M. Almeida & Vinícius D. Mayrink & Enrico A. Colosimo, 2023. "Bayesian solution to the monotone likelihood in the standard mixture cure model," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 77(3), pages 365-390, August.
  • Handle: RePEc:bla:stanee:v:77:y:2023:i:3:p:365-390
    DOI: 10.1111/stan.12289
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    References listed on IDEAS

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    1. Judy P. Sy & Jeremy M. G. Taylor, 2000. "Estimation in a Cox Proportional Hazards Cure Model," Biometrics, The International Biometric Society, vol. 56(1), pages 227-236, March.
    2. Frederico Machado Almeida & Enrico Antônio Colosimo & Vinícius Diniz Mayrink, 2021. "Firth adjusted score function for monotone likelihood in the mixture cure fraction model," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(1), pages 131-155, January.
    3. Andrea Discacciati & Nicola Orsini & Sander Greenland, 2015. "Approximate Bayesian logistic regression via penalized likelihood by data augmentation," Stata Journal, StataCorp LP, vol. 15(3), pages 712-736, September.
    4. Schmidt, Peter & Witte, Ann Dryden, 1989. "Predicting criminal recidivism using 'split population' survival time models," Journal of Econometrics, Elsevier, vol. 40(1), pages 141-159, January.
    5. Peng, Yingwei, 2003. "Estimating baseline distribution in proportional hazards cure models," Computational Statistics & Data Analysis, Elsevier, vol. 42(1-2), pages 187-201, February.
    6. Peijie Wang & Xingwei Tong & Jianguo Sun, 2018. "A semiparametric regression cure model for doubly censored data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 24(3), pages 492-508, July.
    7. Rainey, Carlisle, 2016. "Dealing with Separation in Logistic Regression Models," Political Analysis, Cambridge University Press, vol. 24(3), pages 339-355, July.
    8. Sander Greenland, 2003. "Generalized Conjugate Priors for Bayesian Analysis of Risk and Survival Regressions," Biometrics, The International Biometric Society, vol. 59(1), pages 92-99, March.
    9. Georg Heinze & Michael Schemper, 2001. "A Solution to the Problem of Monotone Likelihood in Cox Regression," Biometrics, The International Biometric Society, vol. 57(1), pages 114-119, March.
    10. Siddhartha Chib & Ivan Jeliazkov, 2005. "Accept–reject Metropolis–Hastings sampling and marginal likelihood estimation," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 59(1), pages 30-44, February.
    11. Dupuis, D. J., 2001. "Fitting log-F models robustly, with an application to the analysis of extreme values," Computational Statistics & Data Analysis, Elsevier, vol. 35(3), pages 321-333, January.
    12. Yingwei Peng & Keith B. G. Dear, 2000. "A Nonparametric Mixture Model for Cure Rate Estimation," Biometrics, The International Biometric Society, vol. 56(1), pages 237-243, March.
    13. Zorn, Christopher, 2005. "A Solution to Separation in Binary Response Models," Political Analysis, Cambridge University Press, vol. 13(2), pages 157-170, April.
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