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Haplotype analysis in population-based association studies

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Author Info
A. P. Mander () (MRC Biostatistics Unit, Cambridge, UK)

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Abstract

This paper describes how to use the command hapipf and introduces the command profhap written for Stata that analyzes population-based genetic data. For these studies, association can be linkage disequilibrium within a set of loci or allelic/haplotype association with disease status. Confidence intervals for odds ratios are calculated with or without adjustment for possible factors that are confounding the relationship. Additionally, this command allows the specification of many models of association that are not widely implemented. Copyright 2001 by Stata Corporation.

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Publisher Info
Article provided by StataCorp LP in its journal Stata Journal.

Volume (Year): 1 (2001)
Issue (Month): 1 (November)
Pages: 58-75
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Handle: RePEc:tsj:stataj:v:1:y:2001:i:1:p:58-75

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Related research
Keywords: haplotype analysis association tests profile likelihood odds ratio

Cited by:
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  1. E. Venkatraman & Nandita Mitra & Colin Begg, 2007. "A Method for Evaluating the Impact of Individual Haplotypes on Disease Incidence in Molecular Epidemiology Studies," Statistical Applications in Genetics and Molecular Biology, Berkeley Electronic Press, vol. 3(1), pages 27. [Downloadable!] (restricted)
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This page was last updated on 2009-1-5.


This information is provided to you by IDEAS at the Department of Economics, College of Liberal Arts and Sciences, University of Connecticut using RePEc data on a server sponsored by the Society for Economic Dynamics.