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On the origin of the phase–space diffusion limit in (dis)ordered protein aggregation

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  • Gadomski, A.
  • Siódmiak, J.
  • Santamaría-Holek, I.

Abstract

Derivation of a phase–space diffusion limit (D-L) allows to obtain a useful formula for a characteristic width of the macroion-channeling filter, controlling model (dis)ordered protein aggregations in a non-ideal aqueous solution. The channel’s width is estimated at the order of an inner half-width of the Stern-type double layer circumventing the growing object and depends in turn on an interplay of the local thermal and electrostatic conditions. The interfacial channeling effect manifests at the edge of biomolecular hydration-duration dependent (non)Markovianity of the system. The interface vs. solution aggregation late-time dynamics are discussed in such local (non)isothermal context with the aim to suggest their experimental assessment.

Suggested Citation

  • Gadomski, A. & Siódmiak, J. & Santamaría-Holek, I., 2013. "On the origin of the phase–space diffusion limit in (dis)ordered protein aggregation," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(15), pages 3155-3167.
  • Handle: RePEc:eee:phsmap:v:392:y:2013:i:15:p:3155-3167
    DOI: 10.1016/j.physa.2013.03.031
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    Keywords

    Films; Interfaces; Crystal; Growth;
    All these keywords.

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