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Targeted Maximum Likelihood Based Causal Inference: Part I

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  • van der Laan Mark J.

    (University of California - Berkeley)

Abstract

Given causal graph assumptions, intervention-specific counterfactual distributions of the data can be defined by the so called G-computation formula, which is obtained by carrying out these interventions on the likelihood of the data factorized according to the causal graph. The obtained G-computation formula represents the counterfactual distribution the data would have had if this intervention would have been enforced on the system generating the data. A causal effect of interest can now be defined as some difference between these counterfactual distributions indexed by different interventions. For example, the interventions can represent static treatment regimens or individualized treatment rules that assign treatment in response to time-dependent covariates, and the causal effects could be defined in terms of features of the mean of the treatment-regimen specific counterfactual outcome of interest as a function of the corresponding treatment regimens. Such features could be defined nonparametrically in terms of so called (nonparametric) marginal structural models for static or individualized treatment rules, whose parameters can be thought of as (smooth) summary measures of differences between the treatment regimen specific counterfactual distributions.In this article, we develop a particular targeted maximum likelihood estimator of causal effects of multiple time point interventions. This involves the use of loss-based super-learning to obtain an initial estimate of the unknown factors of the G-computation formula, and subsequently, applying a target-parameter specific optimal fluctuation function (least favorable parametric submodel) to each estimated factor, estimating the fluctuation parameter(s) with maximum likelihood estimation, and iterating this updating step of the initial factor till convergence. This iterative targeted maximum likelihood updating step makes the resulting estimator of the causal effect double robust in the sense that it is consistent if either the initial estimator is consistent, or the estimator of the optimal fluctuation function is consistent. The optimal fluctuation function is correctly specified if the conditional distributions of the nodes in the causal graph one intervenes upon are correctly specified. The latter conditional distributions often comprise the so called treatment and censoring mechanism. Selection among different targeted maximum likelihood estimators (e.g., indexed by different initial estimators) can be based on loss-based cross-validation such as likelihood based cross-validation or cross-validation based on another appropriate loss function for the distribution of the data. Some specific loss functions are mentioned in this article.Subsequently, a variety of interesting observations about this targeted maximum likelihood estimation procedure are made. This article provides the basis for the subsequent companion Part II-article in which concrete demonstrations for the implementation of the targeted MLE in complex causal effect estimation problems are provided.

Suggested Citation

  • van der Laan Mark J., 2010. "Targeted Maximum Likelihood Based Causal Inference: Part I," The International Journal of Biostatistics, De Gruyter, vol. 6(2), pages 1-45, February.
  • Handle: RePEc:bpj:ijbist:v:6:y:2010:i:2:n:2
    DOI: 10.2202/1557-4679.1211
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    References listed on IDEAS

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    1. van der Laan Mark J. & Petersen Maya L & Joffe Marshall M, 2005. "History-Adjusted Marginal Structural Models and Statically-Optimal Dynamic Treatment Regimens," The International Journal of Biostatistics, De Gruyter, vol. 1(1), pages 1-41, November.
    2. S. A. Murphy, 2003. "Optimal dynamic treatment regimes," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 65(2), pages 331-355, May.
    3. Laan Mark J. van der & Dudoit Sandrine & Vaart Aad W. van der, 2006. "The cross-validated adaptive epsilon-net estimator," Statistics & Risk Modeling, De Gruyter, vol. 24(3), pages 1-23, December.
    4. Alberto Abadie & Guido W. Imbens, 2006. "Large Sample Properties of Matching Estimators for Average Treatment Effects," Econometrica, Econometric Society, vol. 74(1), pages 235-267, January.
    5. van der Laan Mark J. & Dudoit Sandrine & Keles Sunduz, 2004. "Asymptotic Optimality of Likelihood-Based Cross-Validation," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 3(1), pages 1-25, March.
    6. van der Laan Mark J. & Polley Eric C & Hubbard Alan E., 2007. "Super Learner," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 6(1), pages 1-23, September.
    7. P. W. Lavori & R. Dawson, 2000. "A design for testing clinical strategies: biased adaptive within‐subject randomization," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 163(1), pages 29-38.
    8. Rubin Daniel B & van der Laan Mark J., 2008. "Empirical Efficiency Maximization: Improved Locally Efficient Covariate Adjustment in Randomized Experiments and Survival Analysis," The International Journal of Biostatistics, De Gruyter, vol. 4(1), pages 1-40, May.
    9. van der Laan Mark J., 2008. "Estimation Based on Case-Control Designs with Known Prevalence Probability," The International Journal of Biostatistics, De Gruyter, vol. 4(1), pages 1-57, September.
    10. Rose Sherri & van der Laan Mark J., 2008. "Simple Optimal Weighting of Cases and Controls in Case-Control Studies," The International Journal of Biostatistics, De Gruyter, vol. 4(1), pages 1-24, September.
    11. van der Laan Mark J. & Petersen Maya L, 2007. "Causal Effect Models for Realistic Individualized Treatment and Intention to Treat Rules," The International Journal of Biostatistics, De Gruyter, vol. 3(1), pages 1-55, March.
    12. van der Laan Mark J. & Rubin Daniel, 2006. "Targeted Maximum Likelihood Learning," The International Journal of Biostatistics, De Gruyter, vol. 2(1), pages 1-40, December.
    13. Vaart Aad W. van der & Dudoit Sandrine & Laan Mark J. van der, 2006. "Oracle inequalities for multi-fold cross validation," Statistics & Risk Modeling, De Gruyter, vol. 24(3), pages 1-21, December.
    14. Rose Sherri & van der Laan Mark J., 2009. "Why Match? Investigating Matched Case-Control Study Designs with Causal Effect Estimation," The International Journal of Biostatistics, De Gruyter, vol. 5(1), pages 1-26, January.
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    Cited by:

    1. Daniel Jacob, 2021. "CATE meets ML," Digital Finance, Springer, vol. 3(2), pages 99-148, June.
    2. Guo, Xu & Fang, Yun & Zhu, Xuehu & Xu, Wangli & Zhu, Lixing, 2018. "Semiparametric double robust and efficient estimation for mean functionals with response missing at random," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 325-339.
    3. Mireille E. Schnitzer & Erica E.M. Moodie & Mark J. van der Laan & Robert W. Platt & Marina B. Klein, 2014. "Modeling the impact of hepatitis C viral clearance on end-stage liver disease in an HIV co-infected cohort with targeted maximum likelihood estimation," Biometrics, The International Biometric Society, vol. 70(1), pages 144-152, March.
    4. Sara E Moore & Anna Decker & Alan Hubbard & Rachael A Callcut & Erin E Fox & Deborah J del Junco & John B Holcomb & Mohammad H Rahbar & Charles E Wade & Martin A Schreiber & Louis H Alarcon & Karen J , 2015. "Statistical Machines for Trauma Hospital Outcomes Research: Application to the PRospective, Observational, Multi-Center Major Trauma Transfusion (PROMMTT) Study," PLOS ONE, Public Library of Science, vol. 10(8), pages 1-16, August.
    5. Rachael V. Phillips & Mark J. van der Laan, 2022. "Rachael V. Phillips and Mark J. van der Laan’s contribution to the Discussion of ‘Assumption‐lean inference for generalised linear model parameters’ by Vansteelandt and Dukes," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 84(3), pages 717-718, July.
    6. Brathwaite, Timothy & Walker, Joan L., 2018. "Causal inference in travel demand modeling (and the lack thereof)," Journal of choice modelling, Elsevier, vol. 26(C), pages 1-18.
    7. repec:jss:jstsof:43:i13 is not listed on IDEAS
    8. Jacob, Daniel, 2021. "CATE meets ML: Conditional average treatment effect and machine learning," IRTG 1792 Discussion Papers 2021-005, Humboldt University of Berlin, International Research Training Group 1792 "High Dimensional Nonstationary Time Series".
    9. Jason Roy & Kirsten J. Lum & Bret Zeldow & Jordan D. Dworkin & Vincent Lo Re & Michael J. Daniels, 2018. "Bayesian nonparametric generative models for causal inference with missing at random covariates," Biometrics, The International Biometric Society, vol. 74(4), pages 1193-1202, December.

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