Pantelis Bagos (Department of Cell Biology and Biophysics, Faculty of Biology, University of Athens, Greece and Department of Biomedical Informatics, University of Central Greece, Lamia, Greece) Georgios Nikolopoulos (Hellenic Centre for Disease Control and Prevention)
Additional information is available for the following
registered author(s):
We propose here a simple and robust approach for meta-analysis of molecular association studies. Making use of the binary structure of the data, and by treating the genotypes as independent variables in a logistic regression, we apply a simple and commonly used methodology that performs satisfactorily, being at the same time very flexible. We present simple tests for detecting heterogeneity and we describe a random effects extension of the method in order to allow for between studies heterogeneity. We derive also simple tests for assessing the most plausible genetic model of inheritance, and its between-studies heterogeneity as well as adjusting for covariates. The methodology introduced here is easily extended in cases with polytomous or continuous outcomes as well as in cases with more than two alleles. We apply the methodology in several published meta-analyses of genetic association studies with very encouraging results. The main advantages of the proposed methodology is its flexibility and the ease of use, while at the same time covers almost every aspect of a meta-analysis providing overall estimates without the need of multiple comparisons. We anticipate that this simple method would be used in the future in meta-analyses of genetic association studies. A STATA command performing all the available computations is available at http://bioinformatics.biol.uoa.gr/~pbagos/metagen/.
Download Info
To download:
If you experience problems downloading a file, check if you have the
proper application to
view it first. Information about this may be contained
in the File-Format links below. In case of further problems read
the IDEAS help
file. Note that these files are not on the IDEAS
site. Please be patient as the files may be large.
As the access to this document is restricted, you may want to look for a different version under "Related research" (further below) or search for a different version of it.
References listed on IDEAS Please report citation or reference errors to , or , if you are the registered author of the cited work, log in to your RePEc Author Service profile, click on "citations" and make appropriate adjustments.: